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The degree distribution of an ordered tree $T$ with $n$ nodes is $\vec{n} = (n_0,\ldots,n_{n-1})$, where $n_i$ is the number of nodes in $T$ with $i$ children. Let $\mathcal{N}(\vec{n})$ be the number of trees with degree distribution…

Data Structures and Algorithms · Computer Science 2018-07-03 Dekel Tsur

We present a new universal source code for distributions of unlabeled binary and ordinal trees that achieves optimal compression to within lower order terms for all tree sources covered by existing universal codes. At the same time, it…

Data Structures and Algorithms · Computer Science 2021-09-06 J. Ian Munro , Patrick K. Nicholson , Louisa Seelbach Benkner , Sebastian Wild

Given a string $T$, it is known that its suffix tree can be represented using the compact directed acyclic word graph (CDAWG) with $e_T$ arcs, taking overall $O(e_T+e_{{\overline{T}}})$ words of space, where ${\overline{T}}$ is the reverse…

Data Structures and Algorithms · Computer Science 2017-05-25 Djamal Belazzougui , Fabio Cunial

We propose a general data structure CORoBTS for storing B-tree-like search trees dynamically in a cache-oblivious way combining the van Emde Boas memory layout with packed memory array. In the use of the vEB layout mostly search complexity…

Data Structures and Algorithms · Computer Science 2024-10-02 Lukáš Ondráček , Ondřej Mička

Given a tree $T$ on $n$ vertices, and $k, b, s_1, \ldots, s_b \in N$, the Tree Partitioning problem asks if at most $k$ edges can be removed from $T$ so that the resulting components can be grouped into $b$ groups such that the number of…

Computational Complexity · Computer Science 2017-04-21 Zhao An , Qilong Feng , Iyad Kanj , Ge Xia

Consider an input text string T[1,N] drawn from an unbounded alphabet. We study partial computation in suffix-based problems for Data Compression and Text Indexing such as (I) retrieve any segment of K<=N consecutive symbols from the…

Data Structures and Algorithms · Computer Science 2011-10-18 Gianni Franceschini , Roberto Grossi , S. Muthukrishnan

A central task in string processing is text indexing, where the goal is to preprocess a text (a string of length $n$) into an efficient index (a data structure) supporting queries about the text. Cole, Gottlieb, and Lewenstein (STOC 2004)…

Data Structures and Algorithms · Computer Science 2025-10-31 Tomasz Kociumaka , Jakub Radoszewski

We revisit the problem of finding shortest unique substring (SUS) proposed recently by [6]. We propose an optimal $O(n)$ time and space algorithm that can find an SUS for every location of a string of size $n$. Our algorithm significantly…

Data Structures and Algorithms · Computer Science 2014-01-14 Atalay Mert İleri , M. Oğuzhan Külekci , Bojian Xu

LRM-Trees are an elegant way to partition a sequence of values into sorted consecutive blocks, and to express the relative position of the first element of each block within a previous block. They were used to encode ordinal trees and to…

Data Structures and Algorithms · Computer Science 2010-09-30 Jérémy Barbay , Johannes Fischer

Real-world point sets tend to be clustered, so using a machine word for each point is wasteful. In this paper we first show how a compact representation of quadtrees using $\Oh{1}$ bits per node can break this bound on clustered point sets,…

Data Structures and Algorithms · Computer Science 2021-12-10 Guillermo de Bernardo , Travis Gagie , Susana Ladra , Gonzalo Navarro , Diego Seco

In this paper we propose a variant of the induced suffix sorting algorithm by Nong (TOIS, 2013) that computes simultaneously the Lyndon array and the suffix array of a text in $O(n)$ time using $\sigma + O(1)$ words of working space, where…

Data Structures and Algorithms · Computer Science 2020-09-10 Felipe A. Louza , Sabrina Mantaci , Giovanni Manzini , Marinella Sciortino , Guilherme P. Telles

For a static array A of n ordered objects, a range minimum query asks for the position of the minimum between two specified array indices. We show how to preprocess A into a scheme of size 2n+o(n) bits that allows to answer range minimum…

Data Structures and Algorithms · Computer Science 2009-12-02 Johannes Fischer

Given two point sets $R$ and $B$ in the plane, with cardinalities $m$ and $n$, respectively, and each set stored in a separate R-tree, we present an algorithm to decide whether $R$ and $B$ are linearly separable. Our algorithm exploits the…

Data Structures and Algorithms · Computer Science 2016-02-16 Gilberto Gutiérrez , Pablo Pérez-Lantero , Claudio Torres

In previous work, the author introduced the B-treap, a uniquely represented B-tree analogue, and proved strong performance guarantees for it. However, the B-treap maintains complex invariants and is very complex to implement. In this paper…

Data Structures and Algorithms · Computer Science 2015-03-17 Daniel Golovin

Given a set $P$ of $n$ points that are moving in the plane, we consider the problem of computing a spanning tree for these moving points that does not change its combinatorial structure during the point movement. The objective is to…

Computational Geometry · Computer Science 2022-06-28 Haitao Wang , Yiming Zhao

We propose to design data structures called succinct geometric indexes of negligible space (more precisely, o(n) bits) that, by taking advantage of the n points in the data set permuted and stored elsewhere as a sequence, to support…

Computational Geometry · Computer Science 2008-05-28 Prosenjit Bose , Eric Y. Chen , Meng He , Anil Maheshwari , Pat Morin

Assume that an $N$-bit sequence $S$ of $k$ numbers encoded as Elias gamma codes is given as input. We present space-efficient algorithms for sorting, dense ranking and competitive ranking on $S$ in the word RAM model with word size…

Data Structures and Algorithms · Computer Science 2024-09-04 Frank Kammer , Johannes Meintrup , Andrej Sajenko

The k-spectrum of a string is the set of all distinct substrings of length k occurring in the string. K-spectra have many applications in bioinformatics including pseudoalignment and genome assembly. The Spectral Burrows-Wheeler Transform…

Data Structures and Algorithms · Computer Science 2023-06-09 Jarno N. Alanko , Elena Biagi , Simon J. Puglisi

We introduce the lazy search tree data structure. The lazy search tree is a comparison-based data structure on the pointer machine that supports order-based operations such as rank, select, membership, predecessor, successor, minimum, and…

Data Structures and Algorithms · Computer Science 2020-10-20 Bryce Sandlund , Sebastian Wild

We propose algorithms that, given the input string of length $n$ over integer alphabet of size $\sigma$, construct the Burrows-Wheeler transform (BWT), the permuted longest-common-prefix (PLCP) array, and the LZ77 parsing in…

Data Structures and Algorithms · Computer Science 2020-12-09 Dominik Kempa
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