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Epidemics are often modelled using non-linear dynamical systems observed through partial and noisy data. In this paper, we consider stochastic extensions in order to capture unknown influences (changing behaviors, public interventions,…

Applications · Statistics 2012-11-06 Joseph Dureau , Konstantinos Kalogeropoulos , Marc Baguelin

Throughout the course of an epidemic, the rate at which disease spreads varies with behavioral changes, the emergence of new disease variants, and the introduction of mitigation policies. Estimating such changes in transmission rates can…

Methodology · Statistics 2022-11-29 Jenny Huang , Raphaël Morsomme , David Dunson , Jason Xu

We present a unified mathematical approach to epidemiological models with parametric heterogeneity, i.e., to the models that describe individuals in the population as having specific parameter (trait) values that vary from one individuals…

Populations and Evolution · Quantitative Biology 2012-02-14 Artem S. Novozhilov

We consider a space-time SI epidemic model with infection age-dependent infectivity and non-local infections constructed on a grid of the torus $\mathbb{T}^1 =(0, 1]^d$, where the individuals may migrate from node to another. The migration…

Probability · Mathematics 2023-06-06 Anicet Mougabe-Peurkor , Étienne Pardoux , Ténan Yeo

In the study of disease spreading on empirical complex networks in SIR model, initially infected nodes can be ranked according to some measure of their epidemic impact. The highest ranked nodes, also referred to as "superspreaders", are…

Physics and Society · Physics 2014-07-16 Mile Sikic , Alen Lancic , Nino Antulov-Fantulin , Hrvoje Stefancic

We tackle limitations of ordinary differential equation-driven Susceptible-Infections-Removed (SIR) models and their extensions that have recently be employed for epidemic nowcasting and forecasting. In particular, we deal with challenges…

Computation · Statistics 2026-02-10 Angelos Alexopoulos , Paul Birrell , Daniela De Angelis

We present a class of SEIR Markov chain models for infectious diseases observed over discrete time in a random human population living in a closed environment. The population changes over time through random births, deaths, and transitions…

Populations and Evolution · Quantitative Biology 2019-07-30 Divine Wanduku , Chinmoy Rahul

We study the deterministic Susceptible-Infected-Susceptible (SIS) epidemic model on weighted graphs. In their numerical study [10] van Mieghem et al. have shown that it is possible to learn an estimated network from a finite time sample of…

Populations and Evolution · Quantitative Biology 2025-07-09 Dániel Keliger , Illés Horváth

We use the pair heterogeneous mean-field (PHMF) approximation for an asynchronous version of the susceptible-infected-removed (SIR) model to estimate the epidemic thresholds on complex quenched networks. Our results indicate an improvement…

Physics and Society · Physics 2024-02-19 D. S. M. Alencar , T. F. A. Alves , F. W. S. Lima , R. S. Ferreira , G. A. Alves , A. Macedo-Filho

We first generalise ideas discussed by Kiss et al. (2015) to prove a theorem for generating exact closures (here expressing joint probabilities in terms of their constituent marginal probabilities) for susceptible-infectious-removed (SIR)…

Populations and Evolution · Quantitative Biology 2015-04-27 Kieran J Sharkey , Robert R Wilkinson

In this paper we study a susceptible infectious recovered (SIR) model with asymptomatic patients, contact tracing and isolation on a configuration network. Using degree based approximation, we derive a system of differential equations for…

Social and Information Networks · Computer Science 2022-12-20 Duan-Shin Lee , Ting-Zhe Liu , Ruhui Zhang , Cheng-Shang Chang

Stochastic epidemic models provide an interpretable probabilistic description of the spread of a disease through a population. Yet, fitting these models to partially observed data is a notoriously difficult task due to intractability of the…

Computation · Statistics 2022-10-21 Raphael Morsomme , Jason Xu

In the light of several major epidemic events that emerged in the past two decades, and emphasized by the COVID-19 pandemics, the non-Markovian spreading models occurring on complex networks gained significant attention from the scientific…

Physics and Society · Physics 2021-11-30 Igor Tomovski , Lasko Basnarkov , Alajdin Abazi

Mathematical modeling of epidemic propagation on networks is extended to hypergraphs in order to account for both the community structure and the nonlinear dependence of the infection pressure on the number of infected neighbours. The exact…

Dynamical Systems · Mathematics 2016-10-31 Ágnes Bodó , Gyula Y. Katona , Péter L. Simon

An epidemic model where disease transmission can occur either through global contacts or through local, nearest neighbor interactions is considered. The classical SIR--model describing the global interactions is extended by adding…

Populations and Evolution · Quantitative Biology 2022-02-02 Thomas Götz

Motivated by the classical Susceptible-Infected-Recovered (SIR) epidemic models proposed by Kermack and Mckendrick, we consider a class of stochastic compartmental dynamical systems with a notion of partial ordering among the compartments.…

Populations and Evolution · Quantitative Biology 2019-01-03 Wasiur R. KhudaBukhsh , Boseung Choi , Eben Kenah , Grzegorz A. Rempala

We consider the spread of a Susceptible-Infected-Recovered (SIR) disease through finite populations and derive an expression for the final size distribution. Our derivation allows arbitrary distributions of the number of transmissions…

Populations and Evolution · Quantitative Biology 2019-07-12 Joel C Miller

In this article we have successfully obtained an exact solution of a particular case of SIR and SIS epidemic models given by Kermack and Mckendrick [1] for constant population, which are described by coupled nonlinear differential…

Classical Analysis and ODEs · Mathematics 2010-12-23 G. Shabbir , H. Khan , M. A. Sadiq

Predictability of undesired events is a question of great interest in many scientific disciplines including seismology, economy, and epidemiology. Here, we focus on the predictability of invasion of a broad class of epidemics caused by…

Populations and Evolution · Quantitative Biology 2012-10-08 Francisco J. Perez-Reche , Franco M. Neri , Sergei N. Taraskin , Christopher A. Gilligan

One of the popular dynamics on complex networks is the epidemic spreading. An epidemic model describes how infections spread throughout a network. Among the compartmental models used to describe epidemics, the…

Physics and Society · Physics 2011-07-14 Faryad Darabi Sahneh , Caterina Scoglio
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