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Pretraining DNA language models (DNALMs) on the full human genome is resource-intensive, yet often considered necessary for strong downstream performance. Inspired by recent findings in NLP and long-context modeling, we explore an…

Genomics · Quantitative Biology 2025-06-24 Sohan Mupparapu , Parameswari Krishnamurthy , Ratish Puduppully

Large-scale pre-trained language models have demonstrated strong capabilities of generating realistic text. However, it remains challenging to control the generation results. Previous approaches such as prompting are far from sufficient,…

Computation and Language · Computer Science 2021-11-10 Xu Zou , Da Yin , Qingyang Zhong , Ming Ding , Hongxia Yang , Zhilin Yang , Jie Tang

Recent studies have adopted pre-trained language models, such as CodeT5 and CodeGPT, for automated program generation tasks like code generation, repair, and translation. Numerous language model-based approaches have been proposed and…

Software Engineering · Computer Science 2024-01-09 Yue Liu , Chakkrit Tantithamthavorn , Yonghui Liu , Li Li

Neural Machine Translation (NMT) generates target words sequentially in the way of predicting the next word conditioned on the context words. At training time, it predicts with the ground truth words as context while at inference it has to…

Computation and Language · Computer Science 2019-06-18 Wen Zhang , Yang Feng , Fandong Meng , Di You , Qun Liu

Natural language generation (NLG) is an essential component of task-oriented dialogue systems. Despite the recent success of neural approaches for NLG, they are typically developed for particular domains with rich annotated training…

Computation and Language · Computer Science 2019-05-15 Fei Mi , Minlie Huang , Jiyong Zhang , Boi Faltings

Neural networks have recently achieved human-level performance on various challenging natural language processing (NLP) tasks, but it is notoriously difficult to understand why a neural network produced a particular prediction. In this…

Computation and Language · Computer Science 2020-05-01 Sharan Narang , Colin Raffel , Katherine Lee , Adam Roberts , Noah Fiedel , Karishma Malkan

Existing question answering (QA) systems owe much of their success to large, high-quality training data. Such annotation efforts are costly, and the difficulty compounds in the cross-lingual setting. Therefore, prior cross-lingual QA work…

Computation and Language · Computer Science 2023-10-18 Bryan Li , Chris Callison-Burch

Code summarization and generation empower conversion between programming language (PL) and natural language (NL), while code translation avails the migration of legacy code from one PL to another. This paper introduces PLBART, a…

Computation and Language · Computer Science 2021-04-13 Wasi Uddin Ahmad , Saikat Chakraborty , Baishakhi Ray , Kai-Wei Chang

We introduce a linguistically enhanced combination of pre-training methods for transformers. The pre-training objectives include POS-tagging, synset prediction based on semantic knowledge graphs, and parent prediction based on dependency…

Computation and Language · Computer Science 2023-01-02 Maren Pielka , Svetlana Schmidt , Lisa Pucknat , Rafet Sifa

We present Multi-expert Prompting, a novel enhancement of ExpertPrompting (Xu et al., 2023), designed to improve the large language model (LLM) generation. Specifically, it guides an LLM to fulfill an input instruction by simulating…

Computation and Language · Computer Science 2024-11-04 Do Xuan Long , Duong Ngoc Yen , Anh Tuan Luu , Kenji Kawaguchi , Min-Yen Kan , Nancy F. Chen

Few-shot learning with large-scale, pre-trained language models is a powerful way to answer questions about code, e.g., how to complete a given code example, or even generate code snippets from scratch. The success of these models raises…

Software Engineering · Computer Science 2022-06-14 Patrick Bareiß , Beatriz Souza , Marcelo d'Amorim , Michael Pradel

Recent large language models support inputs of up to 10 million tokens, yet they perform poorly on long-context tasks that require complex reasoning. Such tasks can be solved using only a subset of the input -- a proxy context -- rather…

Computation and Language · Computer Science 2026-05-25 Miao Li , Irina Saparina , Alexander Gurung , Mirella Lapata

Recently, large language models (LLMs) have been successfully applied to many fields, showing outstanding comprehension and reasoning capabilities. Despite their great potential, LLMs usually require dedicated pre-training and fine-tuning…

Networking and Internet Architecture · Computer Science 2024-12-31 Hao Zhou , Chengming Hu , Dun Yuan , Ye Yuan , Di Wu , Xi Chen , Hina Tabassum , Xue Liu

Designing de-novo molecules with desired property profiles requires efficient exploration of the vast chemical space ranging from $10^{23}$ to $10^{60}$ possible synthesizable candidates. While various deep generative models have been…

Machine Learning · Computer Science 2025-08-25 Kamran Chitsaz , Roshan Balaji , Quentin Fournier , Nirav Pravinbhai Bhatt , Sarath Chandar

Recent advancements in language modeling have enabled the translation of natural language into code, and the use of execution feedback to improve code generation. However, these methods often rely heavily on pre-existing test cases, which…

Software Engineering · Computer Science 2024-12-19 Nan Wang , Yafei Liu , Chen Chen , Haonan Lu

There is growing interest in the automated extraction of relevant information from clinical dialogues. However, it is difficult to collect and construct large annotated resources for clinical dialogue tasks. Recent developments in natural…

Computation and Language · Computer Science 2022-06-07 Zhengyuan Liu , Pavitra Krishnaswamy , Nancy F. Chen

Recently, unsupervised pre-training is gaining increasing popularity in the realm of computational linguistics, thanks to its surprising success in advancing natural language understanding (NLU) and the potential to effectively exploit…

Computation and Language · Computer Science 2019-11-15 Yuanxin Liu , Zheng Lin

Large language models (LLMs) have shown impressive promise in code generation, yet their progress remains limited by the shortage of large-scale datasets that are both diverse and well-aligned with human reasoning. Most existing resources…

Machine Learning · Computer Science 2025-10-28 Amal Abed , Ivan Lukic , Jörg K. H. Franke , Frank Hutter

Code generation is to automatically generate source code conforming to a given programming specification, which has received extensive attention especially with the development of large language models (LLMs). Due to the inherent difficulty…

Software Engineering · Computer Science 2024-12-20 Zhao Tian , Junjie Chen , Xiangyu Zhang

Pre-trained language models have recently contributed to significant advances in NLP tasks. Recently, multi-modal versions of BERT have been developed, using heavy pre-training relying on vast corpora of aligned textual and image data,…

Computation and Language · Computer Science 2020-12-17 Thomas Scialom , Patrick Bordes , Paul-Alexis Dray , Jacopo Staiano , Patrick Gallinari