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Genomic selection (GS), as a critical crop breeding strategy, plays a key role in enhancing food production and addressing the global hunger crisis. The predominant approaches in GS currently revolve around employing statistical methods for…

Machine Learning · Computer Science 2024-06-25 Renqi Chen , Wenwei Han , Haohao Zhang , Haoyang Su , Zhefan Wang , Xiaolei Liu , Hao Jiang , Wanli Ouyang , Nanqing Dong

Trait measurement is critical for the plant breeding and agricultural production pipeline. Typically, a suite of plant traits is measured using laborious manual measurements and then used to train and/or validate higher throughput trait…

Computer Vision and Pattern Recognition · Computer Science 2021-12-07 Pranav Raja , Alex Olenskyj , Hamid Kamangir , Mason Earles

Nuclear Magnetic Resonance (NMR) spectrometry uses electro-frequency pulses to probe the resonance of a compound's nucleus, which is then analyzed to determine its structure. The acquisition time of high-resolution NMR spectra remains a…

We present a mobile application made to recognize food items of multi-object meal from a single image in real-time, and then return the nutrition facts with components and approximate amounts. Our work is organized in two parts. First, we…

Computer Vision and Pattern Recognition · Computer Science 2019-09-17 Jianing Sun , Katarzyna Radecka , Zeljko Zilic

Hyperspectral imaging captures both spectral and spatial information from a sample. The near infrared (NIR, > 800 nm) is advantageous for biomedical imaging as it falls into the tissue transparency window but also contains vibrational…

Spectral line observations are an indispensable tool to remotely probe the physical and chemical conditions throughout the universe. Modelling their behaviour is a computational challenge that requires dedicated software. In this paper, we…

Instrumentation and Methods for Astrophysics · Physics 2024-11-06 Thomas Ceulemans , Frederik De Ceuster , Leen Decin , Jeremy Yates

Automated phenotyping of plants for breeding and plant studies promises to provide quantitative metrics on plant traits at a previously unattainable observation frequency. Developers of tools for performing high-throughput phenotyping are,…

Computer Vision and Pattern Recognition · Computer Science 2024-03-04 Katherine Margaret Frances James , Karoline Heiwolt , Daniel James Sargent , Grzegorz Cielniak

Recognizing an object's material can inform a robot on the object's fragility or appropriate use. To estimate an object's material during manipulation, many prior works have explored the use of haptic sensing. In this paper, we explore a…

Robotics · Computer Science 2019-01-08 Zackory Erickson , Nathan Luskey , Sonia Chernova , Charles C. Kemp

Hyperspectral imaging provides high-dimensional spatial-temporal-spectral information revealing intrinsic matter characteristics. Here we report an on-chip computational hyperspectral imaging framework with high spatial and temporal…

We describe a computer application designed to analyze hyperspectral data collected by the Compact Infrared Spectrometer for Mars (CRISM). The application links the spectral, imaging and mapping perspectives on the eventual CRISM dataset by…

Instrumentation and Methods for Astrophysics · Physics 2014-01-29 Adrian J. Brown , Michael Storrie-Lombardi

Hyperspectral imaging (HSI) allows researchers to study plant traits non-destructively. By capturing hundreds of narrow spectral bands per pixel, it reveals details about plant biochemistry and stress that standard cameras miss. However,…

Software Engineering · Computer Science 2026-04-15 Rishik Aggarwal , Krisha Joshi , Pappu Kumar Yadav , Jianwei Qin , Thomas F. Burks , Moon S. Kim

Retrieving homologous protein sequences is essential for a broad range of protein modeling tasks such as fitness prediction, protein design, structure modeling, and protein-protein interactions. Traditional workflows have relied on a…

Quantitative Methods · Quantitative Biology 2025-06-11 Ruben Weitzman , Peter Mørch Groth , Lood Van Niekerk , Aoi Otani , Yarin Gal , Debora Marks , Pascal Notin

Miniaturized spectrometers hold great promise for in situ, in vitro, and even in vivo sensing applications. However, their size reduction imposes vital performance constraints in meeting the rigorous demands of spectroscopy, including fine…

Delivering precise point and distributional forecasts across a spectrum of prediction horizons represents a significant and enduring challenge in the application of time-series forecasting within various industries. Prior research on…

Machine Learning · Computer Science 2024-10-22 Jiawen Zhang , Xumeng Wen , Zhenwei Zhang , Shun Zheng , Jia Li , Jiang Bian

It is appealing but challenging to achieve real-time deep neural network (DNN) inference on mobile devices because even the powerful modern mobile devices are considered as ``resource-constrained'' when executing large-scale DNNs. It…

Machine Learning · Computer Science 2021-08-26 Wei Niu , Zhengang Li , Xiaolong Ma , Peiyan Dong , Gang Zhou , Xuehai Qian , Xue Lin , Yanzhi Wang , Bin Ren

We present a novel usage of Transformers to make image classification interpretable. Unlike mainstream classifiers that wait until the last fully connected layer to incorporate class information to make predictions, we investigate a…

Detection Transformers have achieved competitive performance on the sample-rich COCO dataset. However, we show most of them suffer from significant performance drops on small-size datasets, like Cityscapes. In other words, the detection…

Computer Vision and Pattern Recognition · Computer Science 2022-08-26 Wen Wang , Jing Zhang , Yang Cao , Yongliang Shen , Dacheng Tao

Weight pruning is an effective model compression technique to tackle the challenges of achieving real-time deep neural network (DNN) inference on mobile devices. However, prior pruning schemes have limited application scenarios due to…

Machine Learning · Computer Science 2022-03-29 Yifan Gong , Geng Yuan , Zheng Zhan , Wei Niu , Zhengang Li , Pu Zhao , Yuxuan Cai , Sijia Liu , Bin Ren , Xue Lin , Xulong Tang , Yanzhi Wang

The rice panicle traits significantly influence grain yield, making them a primary target for rice phenotyping studies. However, most existing techniques are limited to controlled indoor environments and difficult to capture the rice…

Computer Vision and Pattern Recognition · Computer Science 2024-08-06 Xin Yang , Xuqi Lu , Pengyao Xie , Ziyue Guo , Hui Fang , Haowei Fu , Xiaochun Hu , Zhenbiao Sun , Haiyan Cen

We propose a novel interpretable deep neural network for text classification, called ProtoryNet, based on a new concept of prototype trajectories. Motivated by the prototype theory in modern linguistics, ProtoryNet makes a prediction by…

Machine Learning · Computer Science 2023-11-07 Dat Hong , Tong Wang , Stephen S. Baek