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The dynamic trees problem is to maintain a forest subject to edge insertions and deletions while facilitating queries such as connectivity, path weights, and subtree weights. Dynamic trees are a fundamental building block of a large number…

Data Structures and Algorithms · Computer Science 2020-10-27 Umut A. Acar , Daniel Anderson , Guy E. Blelloch , Laxman Dhulipala , Sam Westrick

We propose a formal model of concurrent systems in which the history of a computation is explicitly represented as a collection of events that provide a view of a sequence of configurations. In our model events generated by transitions…

Logic in Computer Science · Computer Science 2015-09-25 Parosh Abdulla , Giorgio Delzanno , Marco Montali

Let $S$ be a string of length $n$ over an alphabet $\Sigma$ and let $Q$ be a subset of $\Sigma$ of size $q \geq 2$. The 'co-occurrence problem' is to construct a compact data structure that supports the following query: given an integer $w$…

Data Structures and Algorithms · Computer Science 2022-11-11 Philip Bille , Inge Li Gørtz , Tord Stordalen

This paper is a manual with tips and tricks for programming tensor network algorithms with global $SU(2)$ symmetry. We focus on practical details that are many times overlooked when it comes to implementing the basic building blocks of…

Strongly Correlated Electrons · Physics 2020-07-02 Philipp Schmoll , Sukhbinder Singh , Matteo Rizzi , Roman Orus

Pre-trained language models demonstrate general intelligence and common sense, but long inputs quickly become a bottleneck for memorizing information at inference time. We resurface a simple method, Memorizing Transformers (Wu et al.,…

Machine Learning · Computer Science 2024-06-05 Phoebe Klett , Thomas Ahle

Answering connectivity queries is fundamental to fully dynamic graphs where edges and vertices are inserted and deleted frequently. Existing work proposes data structures and algorithms with worst-case guarantees. We propose a new data…

Data Structures and Algorithms · Computer Science 2022-07-19 Qing Chen , Oded Lachish , Sven Helmer , Michael Böhlen

Dimension reduction is a common strategy to study non-linear dynamical systems composed by a large number of variables. The goal is to find a smaller version of the system whose time evolution is easier to predict while preserving some of…

Dynamical Systems · Mathematics 2022-06-23 Marina Vegué , Vincent Thibeault , Patrick Desrosiers , Antoine Allard

In recent years, Deep Learning has gained popularity for its ability to solve complex classification tasks, increasingly delivering better results thanks to the development of more accurate models, the availability of huge volumes of data…

Manipulating downward-closed sets of vectors forms the basis of so-called antichain-based algorithms in verification. In that context, the dimension of the vectors is intimately tied to the size of the input structure to be verified. In…

Logic in Computer Science · Computer Science 2025-02-14 Michaël Cadilhac , Vanessa Flügel , Guillermo A. Pérez , Shrisha Rao

Deep Neural Networks (DNNs) are everywhere, frequently performing a fairly complex task that used to be unimaginable for machines to carry out. In doing so, they do a lot of decision making which, depending on the application, may be…

Machine Learning · Computer Science 2022-11-17 Avriti Chauhan , Mohammad Afzal , Hrishikesh Karmarkar , Yizhak Elboher , Kumar Madhukar , Guy Katz

The growing popularity of shared-memory multiprocessor machines has caused significant changes in the design of concurrent software. In this approach, the concurrently running threads communicate and synchronize with each other through data…

Data Structures and Algorithms · Computer Science 2015-09-24 Konrad Kułakowski

In recent years we have witnessed an increase on the development of methods for submodular optimization, which have been motivated by the wide applicability of submodular functions in real-world data-science problems. In this paper, we…

Data Structures and Algorithms · Computer Science 2022-09-15 Guangyi Zhang , Nikolaj Tatti , Aristides Gionis

Learning with limited data is one of the biggest problems of machine learning. Current approaches to this issue consist in learning general representations from huge amounts of data before fine-tuning the model on a small dataset of…

Machine Learning · Computer Science 2023-02-22 Grégoire Mialon

Subgraph counting aims to count the occurrences of a subgraph template T in a given network G. The basic problem of computing structural properties such as counting triangles and other subgraphs has found applications in diverse domains.…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-03-12 Langshi Chen , Jiayu Li , Ariful Azad , Lei Jiang , Madhav Marathe , Anil Vullikanti , Andrey Nikolaev , Egor Smirnov , Ruslan Israfilov , Judy Qiu

With the advent of high-throughput profiling methods, interest in reverse engineering the structure and dynamics of biochemical networks is high. Recently an algorithm for reverse engineering of biochemical networks was developed by…

Quantitative Methods · Quantitative Biology 2010-01-18 Edgar Delgado-Eckert

Real-world data contains various kinds of errors. Before analyzing data, one usually needs to process the raw data. However, traditional data processing based on exactly match often misses lots of valid information. To get high-quality…

Databases · Computer Science 2017-12-19 Dong Deng

Wavelet trees are widely used in the representation of sequences, permutations, text collections, binary relations, discrete points, and other succinct data structures. We show, however, that this still falls short of exploiting all of the…

Data Structures and Algorithms · Computer Science 2010-11-23 Travis Gagie , Gonzalo Navarro , Simon J. Puglisi

Sequential computation increasingly produces long traces containing nested branches, status transitions, textual payloads, and compact summaries of earlier execution. This paper introduces budgeted dynamic trace structures (BDTS), a…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-25 Faruk Alpay , Levent Sarioglu

This paper shows how to generate efficient tensor algebra code that compute on dynamic sparse tensors, which have sparsity structures that evolve over time. We propose a language for precisely specifying recursive, pointer-based data…

Mathematical Software · Computer Science 2021-12-03 Stephen Chou , Saman Amarasinghe

We construct efficient data structures that are resilient against a constant fraction of adversarial noise. Our model requires that the decoder answers most queries correctly with high probability and for the remaining queries, the decoder…

Data Structures and Algorithms · Computer Science 2010-01-27 Victor Chen , Elena Grigorescu , Ronald de Wolf