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Invasive species have been recognized as a leading threat to biodiversity. In particular, lakes are especially affected by species invasions because they are closed systems sensitive to disruption. Accurately controlling the spread of…

Populations and Evolution · Quantitative Biology 2018-09-18 Katherine Y. Zipp , Yangqingxiang Wu , Kaiyi Wu , Ludmil T. Zikatanov

Understanding and predicting recreational angler effort is important for sustainable fisheries management. However, conventional methods of measuring angler effort, such as surveys, can be costly and limited in both time and spatial extent.…

Physics and Society · Physics 2025-04-21 Julia S. Schmid , Sean Simmons , Mark A. Lewis , Mark S. Poesch , Pouria Ramazi

Aquatic invasive species (AIS) cause significant ecological and economic damages around the world. A major spread mechanism for AIS is traffic of boaters transporting their watercraft from invaded to uninvaded waterbodies. To inhibit the…

Quantitative Methods · Quantitative Biology 2021-05-10 Samuel M. Fischer , Martina Beck , Leif-Matthias Herborg , Mark A. Lewis

Understanding the mechanisms of neural communication in large-scale brain networks remains a major goal in neuroscience. We investigated whether navigation is a parsimonious routing model for connectomics. Navigating a network involves…

Neurons and Cognition · Quantitative Biology 2018-06-05 Caio Seguin , Martijn P. van den Heuvel , Andrew Zalesky

Understanding how to limit biological invasion is critical, especially in the context of accelerating anthropogenic ecological changes. Although biological invasion success could be explained by the lack of natural enemies in new regions,…

Populations and Evolution · Quantitative Biology 2020-10-29 Zhiyuan Fu , Yuanming Lu , Donald DeAngelis , Bo Zhang

We consider the task of classifying trajectories of boat activities as a proxy for assessing maritime threats. Previous approaches have considered entropy-based metrics for clustering boat activity into three broad categories: random walk,…

Machine Learning · Computer Science 2024-10-29 Dhanush Tella , Chandra Teja Tiriveedhi , Naphtali Rishe , Dan E. Tamir , Jonathan I. Tamir

Network intervention problems often benefit from selecting a highly-connected node to perform interventions using these nodes, e.g. immunization. However, in many network contexts, the structure of network connections is unknown, leading to…

Social and Information Networks · Computer Science 2021-05-20 Vineet Kumar , David Krackhardt , Scott Feld

Control studies in ecological models of networks involving invasive plants can offer tangible management strategies. Framing control policies to tackle problems posed by invasive plants on indigenous plant diversity under the sustainable…

Adaptation and Self-Organizing Systems · Physics 2023-06-14 Shyam Kumar , Preet Mishra , R. K. Brojen Singh

Navigation is crucial for animal behavior and is assumed to require an internal representation of the external environment, termed a cognitive map. The precise form of this representation is often considered to be a metric representation of…

Neurons and Cognition · Quantitative Biology 2020-02-10 Tie Xu , Omri Barak

Epidemics occur in all shapes and forms: infections propagating in our sparse sexual networks, rumours and diseases spreading through our much denser social interactions, or viruses circulating on the Internet. With the advent of large…

Physics and Society · Physics 2013-09-02 Laurent Hébert-Dufresne , Antoine Allard , Jean-Gabriel Young , Louis J. Dubé

The spread of non-indigenous species (NIS) through the global shipping network (GSN) has enormous ecological and economic cost throughout the world. Previous attempts at quantifying NIS invasions have mostly taken "bottom-up" approaches…

Social and Information Networks · Computer Science 2014-01-22 J Xu , TL Wickramarathne , EK Grey , K Steinhaeuser , R Keller , J Drake , N Chawla , DM Lodge

Rivers exhibit fractal-like properties that are associated with scaling laws linking geometry and size. The optimal channel network (OCN) model, which is a mathematically tractable representation of river networks often used in theoretical…

Physics and Society · Physics 2025-03-24 E. H. Colombo , A. B. García-Andrade , Ismail , J. M. Calabrese

Invasions of aquatic invasive species have imposed significant economic and ecological damage to global aquatic ecosystems. Once an invasive population has established in a new habitat, eradication can be financially and logistically…

Quantitative Methods · Quantitative Biology 2021-12-08 Amy C. Kinsley , Robert G. Haight , Nicholas Snellgrove , Petra Muellner , Ulrich Muellner , Meg Duhr , Nicholas B. D. Phelps

Infectious diseases in livestock are well-known to infect multiple hosts and persist through the combination of within- and between-host transmission pathways. Uncertainty remains about the epidemic consequences of the disease being…

Quantitative Methods · Quantitative Biology 2022-01-17 Nicolas C. Cardenas , Abagael L. Sykes , Francisco P. N. Lopes , Gustavo Machado

The behavior of ecological systems mainly relies on the interactions between the species it involves. We consider the problem of inferring the species interaction network from abundance data. To be relevant, any network inference…

Applications · Statistics 2019-10-29 Raphaëlle Momal , Stéphane Robin , Christophe Ambroise

Motivated by the swift global transmission of infectious diseases, we present a comprehensive framework for network-based epidemic control. Our aim is to curb epidemics using two different approaches. In the first approach, we introduce an…

Systems and Control · Electrical Eng. & Systems 2026-04-16 Mahtab Talaei , Apostolos I. Rikos , Alex Olshevsky , Laura F. White , Ioannis Ch. Paschalidis

The structure of ecological interactions is commonly understood through analyses of interaction networks. However, these analyses may be sensitive to sampling biases in both the interactors (the nodes of the network) and interactions (the…

A recent problem in community ecology lies in defining structures behind matrices of species interactions. The interest in this area is to quantify the nestedness degree of the matrix after its maximal packing. In this work we evaluate…

Biological Physics · Physics 2008-03-04 Gilberto Corso , Aderaldo I. L. Araujo , Adriana M. Almeida

The function or performance of a network is strongly dependent on its robustness, quantifying the ability of the network to continue functioning under perturbations. While a wide variety of robustness metrics have been proposed, they have…

Social and Information Networks · Computer Science 2023-06-16 Liwang Zhu , Qi Bao , Zhongzhi Zhang

We introduce a new optimization framework to maximize the expected spread of cascades in networks. Our model allows a rich set of actions that directly manipulate cascade dynamics by adding nodes or edges to the network. Our motivating…

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