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Detecting anomalies in dynamic graphs is a vital task, with numerous practical applications in areas such as security, finance, and social media. Previous network embedding based methods have been mostly focusing on learning good node…

Machine Learning · Computer Science 2020-05-26 Lei Cai , Zhengzhang Chen , Chen Luo , Jiaping Gui , Jingchao Ni , Ding Li , Haifeng Chen

The computational cost of simulating quantum many-body systems can often be reduced by taking advantage of physical symmetries. While methods exist for specific symmetry classes, a general algorithm to find the full permutation symmetry…

Quantum Physics · Physics 2025-12-01 Saumya Shah , Patrick Rebentrost

Probabilistic forecasting consists in predicting a distribution of possible future outcomes. In this paper, we address this problem for non-stationary time series, which is very challenging yet crucially important. We introduce the STRIPE…

Machine Learning · Statistics 2021-04-13 Vincent Le Guen , Nicolas Thome

Sovereign network functions, e.g., routing protocols, are becoming increasingly complex and susceptible to failures arising from protocol configuration anomalies and anomalous configurations. This paper interprets the protocol configuration…

Networking and Internet Architecture · Computer Science 2026-05-19 Xin Hao , Wei Ni , Chenhan Zhang , Massimo Piccardi , Raymond Owen

Understanding how small molecules perturb gene expression is essential for uncovering drug mechanisms, predicting off-target effects, and identifying repurposing opportunities. While prior deep learning frameworks have integrated multimodal…

Machine Learning · Computer Science 2026-01-01 Pascal Passigan , Kevin Zhu , Angelina Ning

Graphs provide a natural way to represent data by encoding information about objects and the relationships between them. With the ever-increasing amount of data collected and generated, locating specific patterns of relationships between…

Data Structures and Algorithms · Computer Science 2026-04-28 Tatyana Benko , Rebecca Jones , Lucas Tate

There is a deep connection between permutations and trees. Certain sub-structures of permutations, called sub-permutations, bijectively map to sub-trees of binary increasing trees. This opens a powerful tool set to study enumerative and…

Combinatorics · Mathematics 2014-07-02 Filippo Disanto , Thomas Wiehe

We define the \emph{occurrence graph} $G_p(\pi$) of a pattern $p$ in a permutation $\pi$ as the graph with the occurrences of $p$ in $\pi$ as vertices and edges between the vertices if the occurrences differ by exactly one element. We then…

Combinatorics · Mathematics 2019-08-14 Bjarni Jens Kristinsson , Henning Ulfarsson

Modern high-throughput biological datasets with thousands of perturbations provide the opportunity for large-scale discovery of causal graphs that represent the regulatory interactions between genes. Differentiable causal graphical models…

Machine Learning · Computer Science 2025-11-14 Zaikang Lin , Sei Chang , Aaron Zweig , Minseo Kang , Elham Azizi , David A. Knowles

We introduce a novel method, called Dispersion Entropy for Graph Signals, $DE_G$, as a powerful tool for analysing the irregularity of signals defined on graphs. We demonstrate the effectiveness of $DE_G$ in detecting changes in the…

Combinatorics · Mathematics 2023-04-03 John Stewart Fabila-Carrasco , Chao Tan , Javier Escudero

Anomaly detection is a fundamental yet challenging problem in machine learning due to the lack of label information. In this work, we propose a novel and powerful framework, dubbed as SLA$^2$P, for unsupervised anomaly detection. After…

Machine Learning · Computer Science 2021-11-29 Yizhou Wang , Can Qin , Rongzhe Wei , Yi Xu , Yue Bai , Yun Fu

View missing remains a significant challenge in graph-based multi-view semi-supervised learning, hindering their real-world applications. To address this issue, traditional methods introduce a missing indicator matrix and focus on mining…

Machine Learning · Computer Science 2025-10-22 Zhangqi Jiang , Tingjin Luo , Xu Yang , Xinyan Liang

In this paper, we propose algorithms for the graph isomorphism (GI) problem that are based on the eigendecompositions of the adjacency matrices. The eigenvalues of isomorphic graphs are identical. However, two graphs $ G_A $ and $ G_B $ can…

Discrete Mathematics · Computer Science 2019-08-14 Stefan Klus , Tuhin Sahai

Graph Neural Networks (GNNs) are recently proposed neural network structures for the processing of graph-structured data. Due to their employed neighbor aggregation strategy, existing GNNs focus on capturing node-level information and…

Machine Learning · Computer Science 2022-01-05 Xing Ai , Chengyu Sun , Zhihong Zhang , Edwin R Hancock

Dynamic optimization problems (DOPs) are challenging due to their changing conditions. This requires algorithms to be highly adaptable and efficient in terms of finding rapidly new optimal solutions under changing conditions. Traditional…

Neural and Evolutionary Computing · Computer Science 2025-05-20 Federico Signorelli , Anil Yaman

Owing to the recent advances in "Big Data" modeling and prediction tasks, variational Bayesian estimation has gained popularity due to their ability to provide exact solutions to approximate posteriors. One key technique for approximate…

Machine Learning · Computer Science 2018-03-01 Hamza Anwar , Quanyan Zhu

Cells regulate themselves via dizzyingly complex biochemical processes called signaling pathways. These are usually depicted as a network, where nodes represent proteins and edges indicate their influence on each other. In order to…

Molecular Networks · Quantitative Biology 2021-01-13 David Merrell , Anthony Gitter

An instance $I$ of the Stable Matching Problem (SMP) is given by a bipartite graph with a preference list of neighbors for every vertex. A swap in $I$ is the exchange of two consecutive vertices in a preference list. A swap can be viewed as…

Data Structures and Algorithms · Computer Science 2022-11-16 Eduard Eiben , Gregory Gutin , Philip R. Neary , Clément Rambaud , Magnus Wahlström , Anders Yeo

Large graphs abound in machine learning, data mining, and several related areas. A useful step towards analyzing such graphs is that of obtaining certain summary statistics - e.g., or the expected length of a shortest path between two…

Machine Learning · Statistics 2013-12-02 Mikhail Langovoy , Suvrit Sra

Feature attribution methods, or saliency maps, are one of the most popular approaches for explaining the decisions of complex machine learning models such as deep neural networks. In this study, we propose a stochastic optimization approach…

Machine Learning · Statistics 2018-07-17 Kouichi Ikeno , Satoshi Hara