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Cytoskeletal gels are prototyped to reproduce the mechanical contraction of the cytoskeleton in-vitro. They are composed of a polymer network (backbone), swollen by the presence of a liquid solvent, and active molecules (molecular motors,…

Soft Condensed Matter · Physics 2026-03-27 Matteo Ferraresso , Albert Kong , Mehadi Hasan , Gwynn J. Elfring , Daniele Agostinelli , Mattia Bacca

Colloid-polymer mixtures may undergo either fluid-fluid phase separation or gelation. This depends on the depth of the quench (polymer concentration) and polymer-colloid size ratio. We present a real-space study of dynamics in phase…

Soft Condensed Matter · Physics 2012-09-19 Isla Zhang , C. Patrick Royall , Paul Bartlett , Malcolm A. Faers

The state space of a polymer molecule is analysed. We show how the size of the state space can be reduced on the basis of symmetry. In the reduced state space, the probability of a new state (termed below as class) is equal to the number of…

Computational Physics · Physics 2012-03-30 Malgorzata J. Krawczyk

Microgels are soft colloidal particles that, when dispersed in a solvent, swell and deswell in response to changes in environmental conditions, such as temperature, concentration, and $p$H. Using Monte Carlo simulation, we model bulk…

Soft Condensed Matter · Physics 2016-11-10 Matthew Urich , Alan R. Denton

We investigate the influence of confinement on the positional order of a quasi-1D electron system trapped on the surface of liquid helium. We find evidence that the melting of the Wigner solid (WS) depends on the confinement strength, as…

We investigated the viscoelastic properties of colloid-polymer mixtures at intermediate colloid volume fraction and varying polymer concentrations, thereby tuning the attractive interactions. Within the examined range of polymer…

Soft Condensed Matter · Physics 2008-12-05 M. Laurati , G. Petekidis , N. Koumakis , F. Cardinaux , A. B. Schofield , J. M. Brader , M. Fuchs , S. U. Egelhaaf

Both entangled and unentangled polymer melts exhibit stress overshoots when subject to shearing flow. The size of the overshoot depends on the applied shear rate and is related to relaxation mechanisms such as reptation, chain stretch and…

Soft Condensed Matter · Physics 2024-06-19 Marco Aurelio Galvani Cunha , Peter D. Olmsted , Mark O. Robbins

Solutions of polymer chains are modelled using non-equilibrium Brownian dynamics simulations, with physically associative beads which form reversible crosslinks to establish a system-spanning physical gel network. Rheological properties…

Soft Condensed Matter · Physics 2024-06-19 Dominic Robe , Aritra Santra , Gareth H. McKinley , J. Ravi Prakash

We present Monte Carlo simulations of a dense polymer melt which shows glass-transition-like slowing-down upon cooling, as well as a build up of nematic order. At small wave vectors q this model system shows excess scattering similar to…

Statistical Mechanics · Physics 2009-10-28 H. Weber , W. Paul , W. Kob , K. Binder

The patterns arising from the differential swelling of gels are investigated experimentally and theoretically as a model for the differential growth of living tissues. Two geometries are considered: a thin strip of soft gel clamped to a…

Soft Condensed Matter · Physics 2009-11-11 Thierry Mora , Arezki Boudaoud

Large scale molecular dynamics simulations on graphic processing units (GPUs) are employed to study the scaling behavior of ring polymers with various topological constraints in melts. Typical sizes of rings containing $3_1$, $5_1$ knots…

Soft Condensed Matter · Physics 2015-09-04 Benjamin Trefz , Peter Virnau

We present a kinetic model of crystal growth of polymers of finite molecular weight. Experiments help to classify polymer crystallization broadly into two kinetic regimes. One is observed in melts or in high molar mass polymer solutions and…

Soft Condensed Matter · Physics 2009-11-11 Arindam Kundagrami , M. Muthukumar

Nonequilibrium molecular dynamics simulations are used to study the deformation behavior of disperse polymer melts by tracking test chains of length N = Mw, the weight average molecular weight, in melts of varying dispersity. At high strain…

Soft Condensed Matter · Physics 2025-07-29 Taofeek Tejuosho , Janani Sampath

We visualize entanglements in polymer melts using molecular dynamics simulation. A bead at an entanglement interacts persistently for long times with the non-bonded beads (those excluding the adjacent ones in the same chain). The…

Soft Condensed Matter · Physics 2009-11-10 Ryoichi Yamamoto , Akira Onuki

We investigate the static shear viscosity on the sol side of the vulcanization transition within a minimal mesoscopic model for the Rouse-dynamics of a randomly crosslinked melt of phantom polymers. We derive an exact relation between the…

Statistical Mechanics · Physics 2009-10-31 Kurt Broderix , Henning Loewe , Peter Mueller , Annette Zippelius

We present results of molecular dynamics simulations of very long model polymer chains analyzed by various experimentally relevant techniques. The segment motion of the chains is found to be in very good agreement with the repatation model.…

Soft Condensed Matter · Physics 2009-10-31 Mathias Puetz , Kurt Kremer , Gary S. Grest

Equilibration of polymer melts containing highly entangled long polymer chains in confinement or with free surfaces is a challenge for computer simulations. We approach this problem by first studying polymer melts based on the soft-sphere…

Soft Condensed Matter · Physics 2020-10-14 Hsiao-Ping Hsu , Kurt Kremer

We investigate the crystallization of crosslinked and entangled polymers under external deformation using a coarse-grained poly(vinyl alcohol) (CG-PVA) model and molecular dynamics simulations. Following uniaxial deformation, the systems…

Soft Condensed Matter · Physics 2026-01-19 Atmika Bhardwaj , Huzaifa Shabbir , Jens-Uwe Sommer , Marco Werner

The conformational complexity of linear polymers far exceeds that of point-like atoms and molecules. Polymers can bend, twist, even become knotted. Thus they may also display a much richer phase structure than point particles. But it is not…

Biological Physics · Physics 2015-06-16 Andrey Krokhotin , Stam Nicolis , Antti J. Niemi

The osmotic pressure $P$ in equilibrium polymers (EP) in good solvent is investigated by means of a three dimensional off-lattice Monte Carlo simulation. Our results compare well with real space renormalisation group theory and the osmotic…

Statistical Mechanics · Physics 2009-10-31 A. Milchev , J. P. Wittmer , P. van der Schoot , D. Landau