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We propose a general classification of nonequilibrium steady states in terms of their stationary probability distribution and the associated probability currents. The stationary probabilities can be represented graph-theoretically as…

Statistical Mechanics · Physics 2009-11-11 R. K. P. Zia , B. Schmittmann

The response of a neuron to synaptic input strongly depends on whether or not it has just emitted a spike. We propose a neuron model that after spike emission exhibits a partial response to residual input charges and study its collective…

Neurons and Cognition · Quantitative Biology 2010-06-04 Christoph Kirst , Theo Geisel , Marc Timme

We consider the problem of learning the weighted edges of a balanced mixture of two undirected graphs from epidemic cascades. While mixture models are popular modeling tools, algorithmic development with rigorous guarantees has lagged.…

Social and Information Networks · Computer Science 2020-01-30 Jessica Hoffmann , Soumya Basu , Surbhi Goel , Constantine Caramanis

Cascades arise in many contexts (e.g., neuronal avalanches, social contagions, and system failures). Despite evidence that propagations often involve higher-order dependencies, cascade theory has largely focused on models with…

Adaptation and Self-Organizing Systems · Physics 2022-11-11 Bengier Ulgen Kilic , Dane Taylor

An important challenge in several disciplines is to understand how sudden changes can propagate among coupled systems. Examples include the synchronization of business cycles, population collapse in patchy ecosystems, markets shifting to a…

Physics and Society · Physics 2015-11-12 Charles D. Brummitt , George Barnett , Raissa M. D'Souza

We numerically investigate the onset of multi-chimera states in a linear array of coupled oscillators. As the phase delay $\alpha$ is increased, they exhibit a continuous transition from the globally synchronized state to the multichimera…

Adaptation and Self-Organizing Systems · Physics 2019-07-18 Katsuya Kawase , Nariya Uchida

Interacting systems are prevalent in nature. It is challenging to accurately predict the dynamics of the system if its constituent components are analyzed independently. We develop a graph-based model that unveils the systemic interactions…

Machine Learning · Computer Science 2024-10-31 Giangiacomo Mercatali , Andre Freitas , Jie Chen

Cellular signal transduction usually involves activation cascades, the sequential activation of a series of proteins following the reception of an input signal. Here we study the classic model of weakly activated cascades and obtain…

Molecular Networks · Quantitative Biology 2016-09-15 Mariano Beguerisse-Diaz , Radhika Desikan , Mauricio Barahona

To describe the flow of a miscible quantity on a network, we introduce the graph wave equation where the standard continuous Laplacian is replaced by the graph Laplacian. This is a natural description of an array of inductances and…

Physics and Society · Physics 2012-10-25 Jean-Guy Caputo , Arnaud Knippel , Elie Simo

Strongly chordal digraphs are included in the class of chordal digraphs and generalize strongly chordal graphs and chordal bipartite graphs. They are the digraphs that admit a linear ordering of its vertex set for which their adjacency…

Combinatorics · Mathematics 2025-09-24 Pavol Hell , César Hernández-Cruz , Jing Huang

Unlabeled multigraphs have diverse applications across scientific fields, from transportation and social networks to polymer physics. In particular, multigraphs are essential for studying the relationship between the spatial organization…

Soft Condensed Matter · Physics 2026-01-21 Andrea Bonato

Relationship between agents can be conveniently represented by graphs. When these relationships have different modalities, they are better modelled by multilayer graphs where each layer is associated with one modality. Such graphs arise…

Machine Learning · Statistics 2021-03-05 Guillaume Braun , Hemant Tyagi , Christophe Biernacki

We recall several known results about minimally 2-connected graphs, and show that they all follow from a decomposition theorem. Starting from an analogy with critically 2-connected graphs, we give structural characterizations of the classes…

Discrete Mathematics · Computer Science 2016-03-27 Pierre Aboulker , Marko Radovanović , Nicolas Trotignon , Kristina Vušković

Clustering is the propensity of nodes that share a common neighbour to be connected. It is ubiquitous in many networks but poses many modelling challenges. Clustering typically manifests itself by a higher than expected frequency of…

Dynamical Systems · Mathematics 2016-01-07 Martin Ritchie , Luc Berthouze , Istvan Z. Kiss

Bayesian networks are a widely-used class of probabilistic graphical models capable of representing symmetric conditional independence between variables of interest using the topology of the underlying graph. For categorical variables, they…

Machine Learning · Statistics 2022-10-07 Gherardo Varando , Federico Carli , Manuele Leonelli

A growing set of applications consider the process of network formation by using subgraphs as a tool for generating the network topology. One of the pressing research challenges is thus to be able to use these subgraphs to understand the…

Social and Information Networks · Computer Science 2019-04-11 Soumajyoti Sarkar , Hamidreza Alvari , Paulo Shakarian

In this note, we describe a construction that leads to families of graphs whose critical groups are cyclic. For some of these families we are able to give a formula for the number of spanning trees of the graph, which then determines the…

Combinatorics · Mathematics 2015-04-23 Ryan Becker , Darren Glass

Two structures are said to be equimorphic if each embeds in the other. Such structures cannot be expected to be isomorphic, and in this paper we investigate the special case of linear orders, here also called chains. In particular we…

Combinatorics · Mathematics 2014-07-11 C. Laflamme , M. Pouzet , R. Woodrow

The purpose of this note is threefold. First we state a few conjectures that allow us to rigorously derive a theory which is asymptotic in N (the number of agents) that describes transients in large arrays of (identical) linear damped…

Dynamical Systems · Mathematics 2014-10-10 Carlos E. Cantos , J. J. P. Veerman

We study the behavior of solutions of mutually coupled equations in heterogeneous random graphs. Heterogeneity means that some equations receive many inputs whereas most of the equations are given only with a few connections. Starting from…

Dynamical Systems · Mathematics 2014-09-22 Eduardo Garibaldi , Tiago Pereira