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Microscopy imaging plays a vital role in understanding many biological processes in development and disease. The recent advances in automation of microscopes and development of methods and markers for live cell imaging has led to rapid…

Computer Vision and Pattern Recognition · Computer Science 2017-05-10 Saad Ullah Akram , Juho Kannala , Lauri Eklund , Janne Heikkilä

Cell counting in microscopy images is vital in medicine and biology but extremely tedious and time-consuming to perform manually. While automated methods have advanced in recent years, state-of-the-art approaches tend to increasingly…

Computer Vision and Pattern Recognition · Computer Science 2025-03-19 Zixuan Zheng , Yilei Shi , Chunlei Li , Jingliang Hu , Xiao Xiang Zhu , Lichao Mou

Microbial identification is a central issue in microbiology, in particular in the fields of infectious diseases diagnosis and industrial quality control. The concept of species is tightly linked to the concept of biological and clinical…

Machine Learning · Statistics 2015-06-25 Kévin Vervier , Pierre Mahé , Jean-Baptiste Veyrieras , Jean-Philippe Vert

Image processing and pattern recognition offer a useful and versatile method for optically characterizing drops of a colloidal solution during the drying process and in its final state. This paper exploits image processing techniques…

Soft Condensed Matter · Physics 2020-02-11 Anusuya Pal , Amalesh Gope , Germano S. Iannacchione

Microbiome interventions provide valuable data about microbial ecosystem structure and dynamics. Despite their ubiquity in microbiome research, few rigorous data analysis approaches are available. In this study, we extend transfer…

Applications · Statistics 2023-06-13 Kris Sankaran , Pratheepa Jeganathan

The rapid evolution of deep learning has significantly advanced the field of medical image analysis. However, despite these achievements, the further enhancement of deep learning models for medical image analysis faces a significant…

Image and Video Processing · Electrical Eng. & Systems 2023-10-11 Suruchi Kumari , Pravendra Singh

Image registration plays an important role in comparing images. It is particularly important in analyzing medical images like CT, MRI, PET, etc. to quantify different biological samples, to monitor disease progression and to fuse different…

Computer Vision and Pattern Recognition · Computer Science 2018-10-22 Abdullah Nazib , Clinton Fookes , Dimitri Perrin

In the field of computer- and robot-assisted minimally invasive surgery, enormous progress has been made in recent years based on the recognition of surgical instruments in endoscopic images and videos. In particular, the determination of…

Computer Vision and Pattern Recognition · Computer Science 2024-01-24 Tobias Rueckert , Daniel Rueckert , Christoph Palm

Chromosome analysis and identification from metaphase images is a critical part of cytogenetics based medical diagnosis. It is mainly used for identifying constitutional, prenatal and acquired abnormalities in the diagnosis of genetic…

Computer Vision and Pattern Recognition · Computer Science 2022-09-13 Amritha S Pallavoor , Prajwal A , Sundareshan TS , Sreekanth K Pallavoor

Authors of biomedical publications use gel images to report experimental results such as protein-protein interactions or protein expressions under different conditions. Gel images offer a concise way to communicate such findings, not all of…

Information Retrieval · Computer Science 2014-03-06 Tobias Kuhn , Mate Levente Nagy , ThaiBinh Luong , Michael Krauthammer

Endomicroscopy is an emerging imaging modality, that facilitates the acquisition of in vivo, in situ optical biopsies, assisting diagnostic and potentially therapeutic interventions. While there is a diverse and constantly expanding range…

Computer Vision and Pattern Recognition · Computer Science 2020-01-01 Antonios Perperidis , Kevin Dhaliwal , Stephen McLaughlin , Tom Vercauteren

1) Biological collections house millions of specimens with digital images increasingly available through open-access platforms. However, most imaging protocols were developed for human interpretation without considering automated analysis…

Image segmentation plays a critical role in unlocking the mysteries of the universe, providing astronomers with a clearer perspective on celestial objects within complex astronomical images and data cubes. Manual segmentation, while…

Instrumentation and Methods for Astrophysics · Physics 2024-05-24 Duo Xu , Ye Zhu

In the field of biomedical imaging, ultrasonography has become increasingly widespread, and an important auxiliary diagnostic tool with unique advantages, such as being non-ionising and often portable. This article reviews the…

Signal Processing · Electrical Eng. & Systems 2022-11-08 Tianqi Yang , Oktay Karakuş , Nantheera Anantrasirichai , Alin Achim

In microarray technology, a number of critical steps are required to convert the raw measurements into the data relied upon by biologists and clinicians. These data manipulations, referred to as preprocessing, influence the quality of the…

Applications · Statistics 2009-09-29 Zhijin Wu , Rafael A. Irizarry

The exponential growth of medical imaging has created significant challenges in data storage, transmission, and management for healthcare systems. In this vein, efficient compression becomes increasingly important. Unlike natural image…

Image and Video Processing · Electrical Eng. & Systems 2026-02-10 Guofeng Tong , Sixuan Liu , Yang Lv , Hanyu Pei , Feng-Lei Fan

Medical image segmentation is an increasingly popular area of research in medical imaging processing and analysis. However, many researchers who are new to the field struggle with basic concepts. This tutorial paper aims to provide an…

Image and Video Processing · Electrical Eng. & Systems 2023-04-13 Diedre Carmo , Gustavo Pinheiro , Lívia Rodrigues , Thays Abreu , Roberto Lotufo , Letícia Rittner

Medical image analysis has emerged as an essential element of contemporary healthcare, facilitating physicians in achieving expedited and precise diagnosis. Recent breakthroughs in deep learning, a subset of artificial intelligence, have…

Image and Video Processing · Electrical Eng. & Systems 2024-11-06 Aimina Ali Eli , Abida Ali

Histopathology images; microscopy images of stained tissue biopsies contain fundamental prognostic information that forms the foundation of pathological analysis and diagnostic medicine. However, diagnostics from histopathology images…

Computer Vision and Pattern Recognition · Computer Science 2019-10-30 Aïcha BenTaieb , Ghassan Hamarneh
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