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Approaches to the calculation of the full state vector of a larger epidemiological model for the spread of COVID-19 in Sweden at the initial time instant from available data and with a simplified dynamical model are proposed and evaluated.…

Systems and Control · Electrical Eng. & Systems 2020-07-20 Håkan Runvik , Alexander Medvedev , Robin Eriksson , Stefan Engblom

We propose a novel multi-scale modeling framework for infectious disease spreading, borrowing ideas and modeling tools from the so-called Refractory Density (RD) approach. We introduce a microscopic model that describes the probability of…

Populations and Evolution · Quantitative Biology 2025-03-24 Anton Chizhov , Laurent Pujo-Menjouet , Tilo Schwalger , Mattia Sensi

Reconstructing transmission networks is essential for identifying key factors like superspreaders and high-risk locations, which are critical for developing effective pandemic prevention strategies. In this study, we developed a Bayesian…

Quantitative Methods · Quantitative Biology 2024-09-10 Jianing Xu , Huimin Hu , Gregory Ellison , Lili Yu , Christopher Whalen , Liang Liu

Objectives. Public health officials need tools to assist with anticipating the healthcare resources required to confront the SARS-COV-2 pandemic. We built a modeling tool to aid practicing public health officials with estimating healthcare…

Populations and Evolution · Quantitative Biology 2020-05-14 Gabriel Rainisch , Eduardo A. Undurraga , Gerardo Chowell

We present a System Dynamics (SD) model of the Covid-19 pandemic spread in India. The detailed age-structured compartment-based model endogenously captures various disease transmission pathways, expanding significantly from the standard…

Populations and Evolution · Quantitative Biology 2020-04-21 Jayendran Venkateswaran , Om Damani

We consider the problem of modifying a network topology in such a way as to delay the propagation of a disease with minimal disruption of the network capacity to reroute goods/items/passengers. We find an approximate solution to the…

Physics and Society · Physics 2022-04-15 Paolo Bartesaghi , Ernesto Estrada

An important issue in theoretical epidemiology is the epidemic threshold phenomenon, which specify the conditions for an epidemic to grow or die out. In standard (mean-field-like) compartmental models the concept of the basic reproductive…

Biological Physics · Physics 2007-05-23 D. Alves , V. J. Haas , A. Caliri

We study the behavior of epidemic routing in a delay tolerant network as a function of node density. Focusing on the probability of successful delivery to a destination within a deadline (PS), we show that PS experiences a phase transition…

Networking and Internet Architecture · Computer Science 2020-02-13 Leila Rashidi , Don Towsley , Arman Mohseni-Kabir , Ali Movaghar

We study the problem of containing epidemic spreading processes in temporal networks. We specifically focus on the problem of finding a resource allocation to suppress epidemic infection, provided that an empirical time-series data of…

Social and Information Networks · Computer Science 2019-04-16 Masaki Ogura , Junichi Harada

Social networks are an important infrastructure for information, viruses and innovations propagation. Since users behavior has influenced by other users activity, some groups of people would be made regard to similarity of users interests.…

Social and Information Networks · Computer Science 2013-09-30 Hamidreza Sotoodeh , Farshad Safaei , Arghavan Sanei , Elahe Daei

The detection and management of diseases become quite complicated when pathogens contain asymptomatic phenotypes amongst their ranks, as evident during the recent COVID-19 pandemic. Spreading of diseases has been studied extensively under…

Physics and Society · Physics 2021-10-27 Saptarshi Sinha , Deep Nath , Soumen Roy

In this article, we consider a dynamic epidemiology model for the spread of the COVID-19 infection. Starting from the classical SEIR model, the model is modified so as to better describe characteristic features of the underlying pathogen…

Populations and Evolution · Quantitative Biology 2020-05-22 Daniela Calvetti , Alexander Hoover , Johnie Rose , Erkki Somersalo

The risk of indoor airborne transmission among co-located individuals is generally non-uniform, which remains a critical challenge for public health modelling. Thus, we present CompARE, an integrated risk assessment framework for indoor…

Predicting relative risk (RR) of spatial clusters is a complex task in public health that can be achieved through various statistical and machine-learning methods for different time intervals. However, high-resolution longitudinal data is…

Methodology · Statistics 2025-12-23 Lyza Iamrache , Kamel Rekab , Majid Bani-Yagoub , Julia Pluta , Abdelghani Mehailia

Energy management is a crucial challenge in wireless sensor networks. To date, many techniques have been proposed to reduce energy consumption. Duty cycle methods reduce the energy consumption of wireless sensor networks since energy…

Networking and Internet Architecture · Computer Science 2022-02-22 Mahta Moezzi , Parsa Emamdadi

Current understanding of the critical outbreak condition on temporal networks relies on approximations (time scale separation, discretization) that may bias the results. We propose a theoretical framework to compute the epidemic threshold…

Physics and Society · Physics 2018-02-08 Eugenio Valdano , Michele Re Fiorentin , Chiara Poletto , Vittoria Colizza

Network-based models of epidemic spread have become increasingly popular in recent decades. Despite a rich foundation of such models, few low-dimensional systems for modeling SIS-type diseases have been proposed that manage to capture the…

Dynamical Systems · Mathematics 2021-01-01 Carl Corcoran , Alan Hastings

The present paper introduces a data-driven framework for describing the time-varying nature of an SIRD model in the context of COVID-19. By embedding a rolling regression in a mixed integer bilevel nonlinear programming problem, our aim is…

Populations and Evolution · Quantitative Biology 2021-03-04 Javier Rubio-Herrero , Yuchen Wang

Over the past two decades there has been a number of global outbreaks of viral diseases. This has accelerated the efforts to model and forecast the disease spreading, in order to find ways to confine the spreading regionally and between…

Physics and Society · Physics 2020-07-22 Rafael A. Barrio , Kimmo K. Kaski , Gudmundur G. Haraldsson , Thor Aspelund , Tzipe Govezensky

Lately, concepts such as lockdown, quarantine, and social distancing have become very relevant since they have been associated with essential measures in the prevention and mitigation of COVID-19. While some conclusions about the…

Physics and Society · Physics 2023-04-04 Eric Rozan , Sebastian Bouzat , Marcelo N Kuperman