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With the increasingly availability of digital microscopy imagery equipments there is a demand for efficient execution of whole slide tissue image applications. Through the process of sensitivity analysis it is possible to improve the output…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-11-29 Willian de Oliveira Barreiros Junior , George Teodoro

Machine learning (ML) is increasingly being used in image retrieval systems for medical decision making. One application of ML is to retrieve visually similar medical images from past patients (e.g. tissue from biopsies) to reference when…

We describe the InfraRed Data Reduction (IRDR) software package, a small ANSI C library of fast image processing routines for automated pipeline reduction of infrared (dithered) observations. We developed the software to satisfy certain…

Astrophysics · Physics 2007-05-23 Chris N. Sabbey , Richard G. McMahon , James R. Lewis , Mike J. Irwin

Summary: Biospectrogam is an open-source software for the spectral analysis of DNA and protein sequences. The software can fetch (from NCBI server), import and manage biological data. One can analyze the data using Digital Signal Processing…

Quantitative Methods · Quantitative Biology 2012-10-05 Naman Turakhia , Nilay Chheda , Manish K. Gupta , Ruchin Shah , Jigar Raisinghani

BCI algorithm development has long been hampered by two major issues: small sample sets and a lack of reproducibility. We offer a solution to both of these problems via a software suite that streamlines both the issues of finding and…

Human-Computer Interaction · Computer Science 2018-09-11 Vinay Jayaram , Alexandre Barachant

Despite significant progress of applying deep learning methods to the field of content-based image retrieval, there has not been a software library that covers these methods in a unified manner. In order to fill this gap, we introduce…

Information Retrieval · Computer Science 2020-08-06 Benyi Hu , Ren-Jie Song , Xiu-Shen Wei , Yazhou Yao , Xian-Sheng Hua , Yuehu Liu

Realistic indoor or outdoor image synthesis is a core challenge in computer vision and graphics. The learning-based approach is easy to use but lacks physical consistency, while traditional Physically Based Rendering (PBR) offers high…

Graphics · Computer Science 2025-04-25 Yu Guo , Zhiqiang Lao , Xiyun Song , Yubin Zhou , Zongfang Lin , Heather Yu

Underwater photography presents significant inherent challenges including reduced contrast, spatial blur, and wavelength-dependent color distortions. These effects can obscure the vibrancy of marine life and awareness photographers in…

Computer Vision and Pattern Recognition · Computer Science 2026-02-06 Andreas Mentzelopoulos , Keith Ellenbogen

Recent research in the field of computer vision strongly focuses on deep learning architectures to tackle image processing problems. Deep neural networks are often considered in complex image processing scenarios since traditional computer…

Computer Vision and Pattern Recognition · Computer Science 2021-11-30 Marcel P. Schilling , Luca Rettenberger , Friedrich Münke , Haijun Cui , Anna A. Popova , Pavel A. Levkin , Ralf Mikut , Markus Reischl

We present Digital Collections Explorer, a web-based, open-source exploratory search platform that leverages CLIP (Contrastive Language-Image Pre-training) for enhanced visual discovery of digital collections. Our Digital Collections…

Digital Libraries · Computer Science 2026-01-14 Ying-Hsiang Huang , Benjamin Charles Germain Lee

Table extraction from PDF and image documents is a ubiquitous task in the real-world. Perfect extraction quality is difficult to achieve with one single out-of-box model due to (1) the wide variety of table styles, (2) the lack of training…

Human-Computer Interaction · Computer Science 2021-02-18 Nancy Xin Ru Wang , Douglas Burdick , Yunyao Li

Background Remover (BGR) is a novel software tool developed as a plugin to the well-known ImageJ program and designed to address the challenges of analysing fluorescent microscopy images characterized by low signal-to-noise ratios and…

Instrumentation and Detectors · Physics 2026-04-29 Anna Kilian , Paweł Bilski , Małgorzata Sankowska

Image restoration under real-world degradations is critical for downstream tasks such as autonomous driving and object detection. However, existing restoration models are often limited by the scale and distribution of their training data,…

Computer Vision and Pattern Recognition · Computer Science 2026-03-27 Yufeng Yang , Xianfang Zeng , Zhangqi Jiang , Fukun Yin , Jianzhuang Liu , Wei Cheng , jinghong lan , Shiyu Liu , Yuqi Peng , Gang YU , Shifeng Chen

To reduce and analyze astronomical images, astronomers can rely on a wide range of libraries providing low-level implementations of legacy algorithms. However, combining these routines into robust and functional pipelines requires a major…

Instrumentation and Methods for Astrophysics · Physics 2021-11-17 Lionel J. Garcia , Mathilde Timmermans , Francisco J. Pozuelos , Elsa Ducrot , Michaël Gillon , Laetitia Delrez , Robert D. Wells , Emmanuël Jehin

We present a data simulation package designed to create a series of simulated data samples for a detector with non-destructive sampling capability. The original intent of this software was to provide a method for generating simulated images…

There is a growing privacy concern due to the popularity of social media and surveillance systems, along with advances in face recognition software. However, established image obfuscation techniques are either vulnerable to…

Computer Vision and Pattern Recognition · Computer Science 2021-04-07 Tao Li , Min Soo Choi

Medical image retrieval is a valuable field for supporting clinical decision-making, yet current methods primarily support 2D images and require fully annotated queries, limiting clinical flexibility. To address this, we propose…

Computer Vision and Pattern Recognition · Computer Science 2025-07-14 Inye Na , Nejung Rue , Jiwon Chung , Hyunjin Park

We present the open-source image processing software package PySAP (Python Sparse data Analysis Package) developed for the COmpressed Sensing for Magnetic resonance Imaging and Cosmology (COSMIC) project. This package provides a set of…

Instrumentation and Methods for Astrophysics · Physics 2020-07-03 S. Farrens , A. Grigis , L. El Gueddari , Z. Ramzi , Chaithya G. R. , S. Starck , B. Sarthou , H. Cherkaoui , P. Ciuciu , J. -L. Starck

In recent years, there has been a growing trend in computer vision towards exploiting RAW sensor data, which preserves richer information compared to conventional low-bit RGB images. Early studies mainly focused on enhancing visual quality,…

Computer Vision and Pattern Recognition · Computer Science 2025-09-18 Kai Chen , Jin Xiao , Leheng Zhang , Kexuan Shi , Shuhang Gu

Ease of access to data, tools and models expedites scientific research. In structural biology there are now numerous open repositories of experimental and simulated datasets. Being able to easily access and utilise these is crucial for…

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