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Species tree reconstruction is complicated by effects of Incomplete Lineage Sorting (ILS), commonly modeled by the multi-species coalescent model. While there has been substantial progress in developing methods that estimate a species tree…

Quantitative Methods · Quantitative Biology 2016-05-10 Erfan Sayyari , Siavash Mirarab

This work proposes an ensemble clustering method using transfer learning approach. We consider a clustering problem, in which in addition to data under consideration, "similar" labeled data are available. The datasets can be described with…

Machine Learning · Computer Science 2020-01-22 Vladimir Berikov

Clustering is a well-known unsupervised machine learning approach capable of automatically grouping discrete sets of instances with similar characteristics. Constrained clustering is a semi-supervised extension to this process that can be…

Machine Learning · Computer Science 2023-03-02 Germán González-Almagro , Daniel Peralta , Eli De Poorter , José-Ramón Cano , Salvador García

Partially recorded data are frequently encountered in many applications and usually clustered by first removing incomplete cases or features with missing values, or by imputing missing values, followed by application of a clustering…

Methodology · Statistics 2021-10-20 Emily M. Goren , Ranjan Maitra

Multi-label classification is a challenging task, particularly in domains where the number of labels to be predicted is large. Deep neural networks are often effective at multi-label classification of images and textual data. When dealing…

Machine Learning · Computer Science 2023-03-30 Nikolaos Mylonas , Ioannis Mollas , Nick Bassiliades , Grigorios Tsoumakas

Performing analytic of household load curves (LCs) has significant value in predicting individual electricity consumption patterns, and hence facilitate developing demand-response strategy, and finally achieve energy efficiency improvement…

Data Structures and Algorithms · Computer Science 2018-11-27 Yunyou Huang , Jianfeng Zhan , Nana Wang , Chunjie Luo , Lei Wang , Rui Ren

The literature on concept formation has demonstrated that humans are capable of learning concepts incrementally, with a variety of attribute types, and in both supervised and unsupervised settings. Many models of concept formation focus on…

Artificial Intelligence · Computer Science 2024-10-15 Christopher J. MacLellan , Erik Harpstead , Vincent Aleven , Kenneth R. Koedinger

Multi-label classification is a type of supervised machine learning that can simultaneously assign multiple labels to an instance. To solve this task, some methods divide the original problem into several sub-problems (local approach),…

Machine Learning · Computer Science 2024-11-18 Elaine Cecília Gatto , Felipe Nakano Kenji , Jesse Read , Mauri Ferrandin , Ricardo Cerri , Celine Vens

Android malware have been growing at an exponential pace and becomes a serious threat to mobile users. It appears that most of the anti-malware still relies on the signature-based detection system which is generally slow and often not able…

Cryptography and Security · Computer Science 2019-04-24 Hemant Rathore , Sanjay K. Sahay , Palash Chaturvedi , Mohit Sewak

In supervised machine learning, use of correct labels is extremely important to ensure high accuracy. Unfortunately, most datasets contain corrupted labels. Machine learning models trained on such datasets do not generalize well. Thus,…

Machine Learning · Computer Science 2023-09-14 Chang Yue , Niraj K. Jha

In recent years, the advances in single-cell RNA-seq techniques have enabled us to perform large-scale transcriptomic profiling at single-cell resolution in a high-throughput manner. Unsupervised learning such as data clustering has become…

Genomics · Quantitative Biology 2020-01-07 Shixiong Zhang , Xiangtao Li , Qiuzhen Lin , Ka-Chun Wong

Hash codes are a very efficient data representation needed to be able to cope with the ever growing amounts of data. We introduce a random forest semantic hashing scheme with information-theoretic code aggregation, showing for the first…

Computer Vision and Pattern Recognition · Computer Science 2015-04-20 Qiang Qiu , Guillermo Sapiro , Alex Bronstein

Most classification methods are based on the assumption that data conforms to a stationary distribution. The machine learning domain currently suffers from a lack of classification techniques that are able to detect the occurrence of a…

Machine Learning · Statistics 2012-01-05 Alzennyr Da Silva , Yves Lechevallier , Fabrice Rossi , Francisco De A. T. De Carvahlo

This study focuses on exploring the use of local interpretability methods for explaining time series clustering models. Many of the state-of-the-art clustering models are not directly explainable. To provide explanations for these…

Machine Learning · Computer Science 2022-08-03 Ozan Ozyegen , Nicholas Prayogo , Mucahit Cevik , Ayse Basar

The non-stationary nature of data streams strongly challenges traditional machine learning techniques. Although some solutions have been proposed to extend traditional machine learning techniques for handling data streams, these approaches…

Machine Learning · Computer Science 2021-06-23 Xuyang Yan , Abdollah Homaifar , Mrinmoy Sarkar , Abenezer Girma , Edward Tunstel

A novel approach for forest fire detection using image processing technique is proposed. A rule-based color model for fire pixel classification is used. The proposed algorithm uses RGB and YCbCr color space. The advantage of using YCbCr…

Computer Vision and Pattern Recognition · Computer Science 2024-06-10 Vipin V

Cluster analysis has proved to be an invaluable tool for the exploratory and unsupervised analysis of high dimensional datasets. Among methods for clustering, hierarchical approaches have enjoyed substantial popularity in genomics and other…

Methodology · Statistics 2014-11-20 Patrick K. Kimes , Yufeng Liu , D. Neil Hayes , J. S. Marron

Clustering is a fundamental learning task widely used as a first step in data analysis. For example, biologists use cluster assignments to analyze genome sequences, medical records, or images. Since downstream analysis is typically…

Machine Learning · Computer Science 2024-06-11 Jonathan Svirsky , Ofir Lindenbaum

Single-cell RNA sequencing (scRNA-seq) enables the study of cellular heterogeneity. Yet, clustering accuracy, and with it downstream analyses based on cell labels, remain challenging due to measurement noise and biological variability. In…

Machine Learning · Computer Science 2026-03-03 Dominik Meier , Shixing Yu , Sagnik Nandy , Promit Ghosal , Kyra Gan

t-SNE and hierarchical clustering are popular methods of exploratory data analysis, particularly in biology. Building on recent advances in speeding up t-SNE and obtaining finer-grained structure, we combine the two to create tree-SNE, a…

Machine Learning · Computer Science 2020-02-14 Isaac Robinson , Emma Pierce-Hoffman
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