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Federated Learning (FL) has undergone significant development since its inception in 2016, advancing from basic algorithms to complex methodologies tailored to address diverse challenges and use cases. However, research and benchmarking of…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-07-16 Arnab Mukherjee , Raju Halder , Joydeep Chandra

M2C (Multiphysics Modeling and Computation) is an open-source software for simulating multi-material fluid flows and fluid-structure interactions under extreme conditions, such as high pressures, high temperatures, shock waves, and large…

Fluid Dynamics · Physics 2025-08-25 Xuning Zhao , Wentao Ma , Shafquat Islam , Aditya Narkhede , Kevin Wang

State-of-the-art robotics simulators operate in discrete time. This requires users to choose a time step, which is both critical and challenging: large steps can produce non-physical artifacts, while small steps force the simulation to run…

Robotics · Computer Science 2025-11-13 Vince Kurtz , Alejandro Castro

We introduce FENNIX (Force-Field-Enhanced Neural Network InteraXions), a hybrid approach between machine-learning and force-fields. We leverage state-of-the-art equivariant neural networks to predict local energy contributions and multiple…

Chemical Physics · Physics 2024-07-23 Thomas Plé , Louis Lagardère , Jean-Philip Piquemal

Refinement transforms an abstract system model into a concrete, executable program, such that properties established for the abstract model carry over to the concrete implementation. Refinement has been used successfully in the development…

Logic in Computer Science · Computer Science 2021-10-27 Aurel Bílý , Christoph Matheja , Peter Müller

Motivation: The application of PacBio HiFi and ultra-long ONT reads have achieved huge progress in the contig-level assembly, but it is still challenging to assemble large contigs into chromosomes with available Hi-C scaffolding software,…

Genomics · Quantitative Biology 2021-12-01 Sen Wang , Hengchao Wang , Fan Jiang , Anqi Wang , Hangwei Liu , Hanbo Zhao , Boyuan Yang , Dong Xu , Yan Zhang , Wei Fan

Current system thermal-hydraulic codes have limited credibility in simulating real plant conditions, especially when the geometry and boundary conditions are extrapolated beyond the range of test facilities. This paper proposes a…

Machine Learning · Computer Science 2020-01-14 Han Bao , Nam Dinh , Linyu Lin , Robert Youngblood , Jeffrey Lane , Hongbin Zhang

Single flux quantum (SFQ) based circuits are the subject of renewed attention due to their high speed and their very high energy efficiency. However, the need of cryogenic temperature, the complex physics of Josephson junctions and the lack…

Superconductivity · Physics 2020-04-22 Sasan Razmkhah , Pascal Febvre

We extend the finite element interpolated neural network (FEINN) framework from partial differential equations (PDEs) with weak solutions in $H^1$ to PDEs with weak solutions in $H(\textbf{curl})$ or $H(\textbf{div})$. To this end, we…

Numerical Analysis · Mathematics 2025-03-17 Santiago Badia , Wei Li , Alberto F. Martín

ParticLS (\emph{Partic}le \emph{L}evel \emph{S}ets) is a software library that implements the discrete element method (DEM) and meshfree methods. ParticLS tracks the interaction between individual particles whose geometries are defined by…

Mathematical Software · Computer Science 2022-04-26 Andrew D. Davis , Brendan A. West , Nathanael J. Frisch , Devin T. O'Connor , Matthew D. Parno

We present FedScale, a federated learning (FL) benchmarking suite with realistic datasets and a scalable runtime to enable reproducible FL research. FedScale datasets encompass a wide range of critical FL tasks, ranging from image…

Machine Learning · Computer Science 2022-06-22 Fan Lai , Yinwei Dai , Sanjay S. Singapuram , Jiachen Liu , Xiangfeng Zhu , Harsha V. Madhyastha , Mosharaf Chowdhury

Simulation of the intermediate levels of disorder found in multi-component multi-sublattice systems in various functional materials is a challenging issue, even for state-of-the-art methodologies based on first-principles calculation. Here,…

Materials Science · Physics 2023-09-12 Shusuke Kasamatsu , Yuichi Motoyama , Kazuyoshi Yoshimi , Tatsumi Aoyama

As scientific applications extend to the simulation of more and more complex systems, they involve an increasing number of abstraction levels, at each of which errors can emerge and across which they can propagate; tools for correctness…

Software Engineering · Computer Science 2011-01-18 Eloisa Bentivegna , Gabrielle Allen , Oleg Korobkin , Erik Schnetter

Fuzzy Cognitive Maps (FCMs) are considered a soft computing technique combining elements of fuzzy logic and recurrent neural networks. They found multiple application in such domains as modeling of system behavior, prediction of time…

Machine Learning · Computer Science 2021-03-16 Piotr Szwed

We leverage highly successful prior projects sponsored by multiple NSF grants and gifts from industry: the BLAS-like Library Instantiation Software (BLIS) and the libflame efforts to lay the foundation for a new flexible framework by…

Mathematical Software · Computer Science 2026-04-09 Devin A. Matthews , Tze Meng Low , Margaret E. Myers , Devangi N. Parikh , Robert A. van de Geijn

In this paper we demonstrate a new technique for deriving discrete adjoint and tangent linear models of finite element models. The technique is significantly more efficient and automatic than standard algorithmic differentiation techniques.…

Mathematical Software · Computer Science 2013-10-17 Patrick E. Farrell , David A. Ham , Simon F. Funke , Marie E. Rognes

The MFEM (Modular Finite Element Methods) library is a high-performance C++ library for finite element discretizations. MFEM supports numerous types of finite element methods and is the discretization engine powering many computational…

The open source ALPS (Algorithms and Libraries for Physics Simulations) project provides a collection of physics libraries and applications, with a focus on simulations of lattice models and strongly correlated systems. The libraries…

We report a new version of fermion coupled coherent states method (FCCS-II) to simulate two-electron systems based on a self-symmetrized six-dimensional (6D) coherent states grid. Unlike the older fermion coupled coherent states method…

Atomic Physics · Physics 2016-05-03 Mohammadreza Eidi , Mohsen Vafaee , Ali Reza Niknam , Nader Morshedian

Metadata play a crucial role in adopting the FAIR principles for research software and enables findability and reusability. However, creating high-quality metadata can be resource-intensive for researchers and research software engineers.…

Software Engineering · Computer Science 2025-12-17 Stephan Ferenz , Aida Jafarbigloo , Oliver Werth , Astrid Nieße