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We investigate distances on binary (presence/absence) data in the context of a Dollo process, where a trait can only arise once on a phylogenetic tree but may be lost many times. We introduce a novel distance, the Additive Dollo Distance…

Quantitative Methods · Quantitative Biology 2012-03-02 Michael Woodhams , Dorothy A. Steane , Rebecca C. Jones , Dean Nicolle , Vincent Moulton , Barbara R. Holland

Motivated by the remarkable success of Bayesian additive regression trees (BART) in regression modelling, we propose a novel nonparametric Bayesian method, termed Functional BART (FBART), tailored specifically for function-on-scalar…

Methodology · Statistics 2025-06-03 Jiahao Cao , Shiyuan He , Bohai Zhang

Atlas construction is fundamental to medical image analysis, offering a standardized spatial reference for tasks such as population-level anatomical modeling. While data-driven registration methods have recently shown promise in pairwise…

Computer Vision and Pattern Recognition · Computer Science 2025-08-15 Ziwei Zou , Bei Zou , Xiaoyan Kui , Wenqi Lu , Haoran Dou , Arezoo Zakeri , Timothy Cootes , Alejandro F Frangi , Jinming Duan

Differentiable ARchiTecture Search, i.e., DARTS, has drawn great attention in neural architecture search. It tries to find the optimal architecture in a shallow search network and then measures its performance in a deep evaluation network.…

Computer Vision and Pattern Recognition · Computer Science 2022-04-26 Hongyuan Yu , Houwen Peng , Yan Huang , Jianlong Fu , Hao Du , Liang Wang , Haibin Ling

Model-based reinforcement learning agents utilizing transformers have shown improved sample efficiency due to their ability to model extended context, resulting in more accurate world models. However, for complex reasoning and planning…

Machine Learning · Computer Science 2024-06-04 Pranav Agarwal , Sheldon Andrews , Samira Ebrahimi Kahou

We propose a new end-to-end model that treats AMR parsing as a series of dual decisions on the input sequence and the incrementally constructed graph. At each time step, our model performs multiple rounds of attention, reasoning, and…

Computation and Language · Computer Science 2020-04-30 Deng Cai , Wai Lam

Adaptive Random Testing (ART) enhances the testing effectiveness (including fault-detection capability) of Random Testing (RT) by increasing the diversity of the random test cases throughout the input domain. Many ART algorithms have been…

Software Engineering · Computer Science 2024-03-20 Rubing Huang , Chenhui Cui , Junlong Lian , Dave Towey , Weifeng Sun , Haibo Chen

The growing demand for personalized decision-making has led to a surge of interest in estimating the Conditional Average Treatment Effect (CATE). Various types of CATE estimators have been developed with advancements in machine learning and…

Machine Learning · Computer Science 2024-11-04 Yiyan Huang , Cheuk Hang Leung , Siyi Wang , Yijun Li , Qi Wu

Multiple object tracking (MOT) is a fundamental component of perception systems for autonomous driving, and its robustness to unseen conditions is a requirement to avoid life-critical failures. Despite the urge of safety in driving systems,…

Computer Vision and Pattern Recognition · Computer Science 2023-10-04 Mattia Segu , Bernt Schiele , Fisher Yu

Through participatory design, we are developing a computational system for the semi-automated assessment of the Action Research Arm Test (ARAT) for stroke rehabilitation. During rehabilitation assessment, clinicians rate movement segments…

Human-Computer Interaction · Computer Science 2025-01-03 Tamim Ahmed , Zhaoyi Guo , Mohammod Shaikh Sadid Khan , Thanassis Rikakis , Aisling Kelliher

Current deep neural networks (DNNs) are vulnerable to adversarial attacks, where adversarial perturbations to the inputs can change or manipulate classification. To defend against such attacks, an effective and popular approach, known as…

Machine Learning · Computer Science 2022-09-08 Gaoyuan Zhang , Songtao Lu , Yihua Zhang , Xiangyi Chen , Pin-Yu Chen , Quanfu Fan , Lee Martie , Lior Horesh , Mingyi Hong , Sijia Liu

Decision Trees (DTs) are commonly used for many machine learning tasks due to their high degree of interpretability. However, learning a DT from data is a difficult optimization problem, as it is non-convex and non-differentiable.…

Machine Learning · Computer Science 2024-08-20 Sascha Marton , Stefan Lüdtke , Christian Bartelt , Heiner Stuckenschmidt

Traffic prediction is a cornerstone of modern intelligent transportation systems and a critical task in spatio-temporal forecasting. Although advanced Spatio-temporal Graph Neural Networks (STGNNs) and pre-trained models have achieved…

Machine Learning · Computer Science 2026-01-01 Weilin Ruan , Xilin Dang , Ziyu Zhou , Sisuo Lyu , Yuxuan Liang

Constrained by the low-rank bottleneck inherent in attention mechanisms, current stereo matching transformers suffer from limited nonlinear expressivity, which renders their feature representations sensitive to challenging conditions such…

Computer Vision and Pattern Recognition · Computer Science 2025-08-26 Ziyang Chen , Wenting Li , Yongjun Zhang , Yabo Wu , Bingshu Wang , Yong Zhao , C. L. Philip Chen

Various modifications of decision trees have been extensively used during the past years due to their high efficiency and interpretability. Tree node splitting based on relevant feature selection is a key step of decision tree learning, at…

Machine Learning · Computer Science 2017-09-05 Dmitry Ignatov , Andrey Ignatov

Current implementations of Bayesian Additive Regression Trees (BART) are based on axis-aligned decision rules that recursively partition the feature space using a single feature at a time. Several authors have demonstrated that oblique…

Machine Learning · Statistics 2024-11-14 Paul-Hieu V. Nguyen , Ryan Yee , Sameer K. Deshpande

Test-time adaptation aims to improve model robustness under distribution shifts by adapting models with access to unlabeled target samples. A primary cause of performance degradation under such shifts is the model's reliance on features…

Machine Learning · Computer Science 2025-10-14 Yingnan Liu , Rui Qiao , Mong Li Lee , Wynne Hsu

Deformable image registration, estimating the spatial transformation between different images, is an important task in medical imaging. Many previous studies have used learning-based methods for multi-stage registration to perform 3D image…

Computer Vision and Pattern Recognition · Computer Science 2024-07-23 Jian-Qing Zheng , Ziyang Wang , Baoru Huang , Ngee Han Lim , Tonia Vincent , Bartlomiej W. Papiez

Computerized Adaptive Testing (CAT) offers an efficient and personalized method for assessing examinee proficiency by dynamically adjusting test questions based on individual performance. Compared to traditional, non-personalized testing…

We propose a novel Auto-Regressive (AR) image generation approach that models images as hierarchical compositions of interpretable visual layers. While AR models have achieved transformative success in language modeling, replicating this…

Computer Vision and Pattern Recognition · Computer Science 2025-11-13 Siddharth Roheda , Rohit Chowdhury , Aniruddha Bala , Rohan Jaiswal
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