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Ocean acidification is a threat to deep-sea corals and could lead to dramatic and rapid loss of the reef framework habitat they build. Weakening of structurally critical parts of the coral reef framework can lead to physical habitat…

The storage effect is a general explanation for ecological coexistence, wherein different species specialize on different states of a fluctuating environment, e.g., hot vs. cold years. Despite the storage effect's prominence in theoretical…

Populations and Evolution · Quantitative Biology 2025-06-05 Evan C. Johnson , Sean R. Connolly

A typical phase field approach for describing phase separation and coarsening phenomena in alloys is the Cahn-Hilliard model. This model has been generalized to the so-called Cahn-Larch\'e system by combining it with elasticity to capture…

Analysis of PDEs · Mathematics 2015-02-23 Christian Heinemann , Christiane Kraus

The composition of ecological communities varies not only between different locations but also in time. Understanding the fundamental processes that drive species towards rarity or abundance is crucial to assessing ecosystem resilience and…

Populations and Evolution · Quantitative Biology 2024-11-22 Emil Mallmin , Arne Traulsen , Silvia De Monte

A recombination reaction model for high-temperature chemical kinetics is derived from ab initio simulations data. A kinetic recombination rate model is derived using a recently developed ab initio state-specific dissociation model and the…

Chemical Physics · Physics 2020-09-15 Narendra Singh , Thomas Schwartzentruber

Planktonic communities are extremely diverse and include a vast number of rare species. The dynamics of these rare species is best described by individual-based models. However, individual-based approaches to planktonic diversity face…

Populations and Evolution · Quantitative Biology 2022-04-12 Paula Villa Martin , Anzhelika Koldaeva , Simone Pigolotti

This paper deals with the following quasilinear Keller-Segel-Navier-Stokes system modeling coral fertilization $(*)$: $$\left\{ \begin{array}{l} n_t+u\cdot\nabla n=\Delta n-\nabla\cdot(nS(x,n,c)\nabla c)-nm,\quad x\in \Omega, t>0,…

Analysis of PDEs · Mathematics 2019-08-05 Jiashan Zheng

The evolution of inflationary fluctuations can be recast as an inverse scattering problem. In this context, we employ the Gel'fand-Levitan method from inverse-scattering theory to reconstruct the evolution of both the inflaton field…

Cosmology and Nongalactic Astrophysics · Physics 2017-03-15 Jorge Mastache , Fernando Zago , Arthur Kosowsky

This paper is concerned with the four-component Keller--Segel--Stokes system modelling the fertilization process of corals: \begin{equation*} \left\{ \begin{array}{ll}…

Analysis of PDEs · Mathematics 2019-09-04 Jing Li , Peter Y. H. Pang , Yifu Wang

We offer an alternative real-space description, based purely on activated processes, for the understanding of relaxation dynamics in hierarchical landscapes. To this end, we use the cluster model, a coarse-grained lattice model of a jammed…

Soft Condensed Matter · Physics 2024-06-27 Mahajabin Rahman , Stefan Boettcher

We study holographic models related to global quantum quenches in finite size systems. The holographic set up describes naturally a CFT, which we consider on a circle and a sphere. The enhanced symmetry of the conformal group on the circle…

High Energy Physics - Theory · Physics 2015-06-23 Emilia da Silva , Esperanza Lopez , Javier Mas , Alexandre Serantes

The Kinetic Monte Carlo (KMC) method has become an important tool for examination of phenomena like surface diffusion and thin film growth because of its ability to carry out simulations for time scales that are relevant to experiments. But…

Materials Science · Physics 2007-05-23 Talat S. Rahman , Abdelkader Kara , Altaf Karim , Oleg Trushin

We focus on the long term dynamics of "killing the winner" Lotka-Volterra models of marine communities consisting of bacteria, virus, and zooplankton. Under suitable conditions, it is shown that there is a unique equilibrium with all…

Populations and Evolution · Quantitative Biology 2016-07-22 Daniel A. Korytowski , Hal L. Smith

Coral reefs are dynamic systems whose composition is highly influenced by unpredictable biotic and abiotic factors. Understanding the spatial scale at which long-term predictions of reef composition can be made will be crucial for guiding…

Populations and Evolution · Quantitative Biology 2016-06-28 Katherine A. Allen , John F. Bruno , Fiona Chong , Damian Clancy , Tim R. McClanahan , Matthew Spencer , Kamila Zychaluk

Behavior analysis of animals involves the observation of intraspecific and interspecific interactions among various organisms in the environment. Collective behavior such as herding in farm animals, flocking of birds, and shoaling and…

Computer Vision and Pattern Recognition · Computer Science 2020-06-30 Riza Rae Pineda , Kristofer delas Peñas , Dana Manogan

Molecular motors convert chemical energy derived from the hydrolysis of ATP into mechanical energy. A well-studied model of a molecular motor is the flashing ratchet model. We show that this model exhibits a fluctuation relation known as…

Statistical Mechanics · Physics 2015-05-13 D. Lacoste , K. Mallick

We study the long-term behaviour of solutions to a one-dimensional coupled wave-heat system with Coleman-Gurtin thermal law. Our approach is based on the asymptotic theory of $C_0$-semigroups and recent results developed for coupled control…

Analysis of PDEs · Mathematics 2022-10-05 Filippo Dell'Oro , Lassi Paunonen , David Seifert

While biological crystallization processes have been studied on the microscale extensively, models addressing the mesoscale aspects of such phenomena are rare. In this work, we investigate whether the phase-field theory developed in…

This paper studies the traveling wave solutions to a three species competition cooperation system. The existence of the traveling waves is investigated via monotone iteration method. The upper and lower solutions come from either the waves…

Analysis of PDEs · Mathematics 2013-01-25 Xiaojie Hou , Yi Li

21-cm intensity surveys aim to map neutral hydrogen atoms in the universe through hyper-fine emission. Unfortunately, long-wavelength (low-wavenumber) radial modes are highly contaminated by smooth astrophysical foregrounds that are six…

Cosmology and Nongalactic Astrophysics · Physics 2019-08-21 Naim Goksel Karacayli , Nikhil Padmanabhan