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As the amount of available data continues to grow in fields as diverse as bioinformatics, physics, and remote sensing, the importance of scientific workflows in the design and implementation of reproducible data analysis pipelines…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-02-11 Jonathan Bader , Fabian Skalski , Fabian Lehmann , Dominik Scheinert , Jonathan Will , Lauritz Thamsen , Odej Kao

Challenges related to development, deployment, and maintenance of reusable software for science are becoming a growing concern. Many scientists' research increasingly depends on the quality and availability of software upon which their…

Recent advancements in large language models (LLMs) have driven a revolutionary paradigm shift in process automation from Robotic Process Automation to Agentic Process Automation by automating the workflow orchestration procedure based on…

Software Engineering · Computer Science 2024-11-11 Shengda Fan , Xin Cong , Yuepeng Fu , Zhong Zhang , Shuyan Zhang , Yuanwei Liu , Yesai Wu , Yankai Lin , Zhiyuan Liu , Maosong Sun

The networking field is characterized by its high complexity and rapid iteration, requiring extensive expertise to accomplish network tasks, ranging from network design, configuration, diagnosis and security. The inherent complexity of…

Networking and Internet Architecture · Computer Science 2024-04-30 Chang Liu , Xiaohui Xie , Xinggong Zhang , Yong Cui

In this position paper we argue for standardizing how we share and process data in scientific workflows at the network-level to maximize step re-use and workflow portability across platforms and networks in pursuit of a foundational…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-12-19 Taylor Paul , William Regli

For teams using distributed version control systems, the right collaborative development workflows can help maintaining the long-term quality of project repositories and improving work efficiency. Despite the fact that the workflows are…

Software Engineering · Computer Science 2020-04-28 Panuchart Bunyakiati , Usa Sammapun

This paper discusses some generic approach for developing grid-based framework for enabling establishment of workflows comprising existing software in computational sciences areas. We highlight the main requirements addressed the developing…

Distributed, Parallel, and Cluster Computing · Computer Science 2011-06-21 Vladimir Berezovsky , Alexander Popov

Realistic, relevant, and reproducible experiments often need input traces collected from real-world environments. We focus in this work on traces of workflows---common in datacenters, clouds, and HPC infrastructures. We show that the…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-07-12 Laurens Versluis , Roland Mathá , Sacheendra Talluri , Tim Hegeman , Radu Prodan , Ewa Deelman , Alexandru Iosup

The proliferation of commercial cloud computing providers has generated significant interest in the scientific computing community. Much recent research has attempted to determine the benefits and drawbacks of cloud computing for scientific…

Instrumentation and Methods for Astrophysics · Physics 2016-11-15 Gideon Juve , Ewa Deelman , Karan Vahi , Gaurang Mehta , Bruce Berriman , Benjamin P. Berman , Phil Maechling

Emerging data-driven scientific workflows are seeking to leverage distributed data sources to understand end-to-end phenomena, drive experimentation, and facilitate important decision-making. Despite the exponential growth of available…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-06-10 Manish Parashar

Increasing popularity of the serverless computing approach has led to the emergence of new cloud infrastructures working in Container-as-a-Service (CaaS) model like AWS Fargate, Google Cloud Run, or Azure Container Instances. They introduce…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-10-23 Krzysztof Burkat , Maciej Pawlik , Bartosz Balis , Maciej Malawski , Karan Vahi , Mats Rynge , Rafael Ferreira da Silva , Ewa Deelman

Leadership computing facilities around the world support cutting-edge scientific research across a broad spectrum of disciplines including understanding climate change, combating opioid addiction, or simulating the decay of a neutron. While…

High Energy Physics - Lattice · Physics 2020-04-16 Chia Cheng Chang , Christopher Körber , André Walker-Loud

Large systems biology projects can encompass several workgroups often located in different countries. An overview about existing data standards in systems biology and the management, storage, exchange and integration of the generated data…

Databases · Computer Science 2009-12-15 Gerhard Mayer

Just like the scientific data they generate, simulation workflows for research should be findable, accessible, interoperable, and reusable (FAIR). However, while significant progress has been made towards FAIR data, the majority of science…

Digital Libraries · Computer Science 2022-05-04 Martin Hunt , Steven Clark , Daniel Mejia , Saaketh Desai , Alejandro Strachan

Increasingly, scientific discovery requires sophisticated and scalable workflows. Workflows have become the ``new applications,'' wherein multi-scale computing campaigns comprise multiple and heterogeneous executable tasks. In particular,…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-08-26 Shantenu Jha , Vincent R. Pascuzzi , Matteo Turilli

Climate science is critical for understanding both the causes and consequences of changes in global temperatures and has become imperative for decisive policy-making. However, climate science studies commonly require addressing complex…

Machine Learning · Computer Science 2020-09-23 Juan Carrillo , Daniel Garijo , Mark Crowley , Rober Carrillo , Yolanda Gil , Katherine Borda

Background: As Machine Learning (ML) advances rapidly in many fields, it is being adopted by academics and businesses alike. However, ML has a number of different challenges in terms of maintenance not found in traditional software…

Artificial Intelligence · Computer Science 2024-08-20 Karthik Shivashankar , Antonio Martini

The FAIR principles for scientific data (Findable, Accessible, Interoperable, Reusable) are also relevant to other digital objects such as research software and scientific workflows that operate on scientific data. The FAIR principles can…

Digital Libraries · Computer Science 2022-12-16 Sean R. Wilkinson , Greg Eisenhauer , Anuj J. Kapadia , Kathryn Knight , Jeremy Logan , Patrick Widener , Matthew Wolf

Advances in robotic automation, high-performance computing (HPC), and artificial intelligence (AI) encourage us to conceive of science factories: large, general-purpose computation- and AI-enabled self-driving laboratories (SDLs) with the…

Data-intensive scientific workflows increasingly rely on high-performance computing (HPC) systems, complementing traditional Grid and Cloud platforms. However, workflow scheduling on HPC infrastructures remains challenging due to the…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-11-26 Aurelio Vivas , Harold Castro
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