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Scientific workflow management systems (SWMSs) and resource managers together ensure that tasks are scheduled on provisioned resources so that all dependencies are obeyed, and some optimization goal, such as makespan minimization, is…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-07-17 Fabian Lehmann , Jonathan Bader , Friedrich Tschirpke , Lauritz Thamsen , Ulf Leser

Scientific workflow management systems support large-scale data analysis on cluster infrastructures. For this, they interact with resource managers which schedule workflow tasks onto cluster nodes. In addition to workflow task descriptions,…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-04-30 Jonathan Bader , Kathleen West , Soeren Becker , Svetlana Kulagina , Fabian Lehmann , Lauritz Thamsen , Henning Meyerhenke , Odej Kao

Workflows are critical for scientific discovery. However, the sophistication, heterogeneity, and scale of workflows make building, testing, and optimizing them increasingly challenging. Furthermore, their complexity and heterogeneity make…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-03-28 Ozgur Ozan Kilic , Tianle Wang , Matteo Turilli , Mikhail Titov , Andre Merzky , Line Pouchard , Shantenu Jha

In this survey, we discuss the challenges of executing scientific workflows as well as existing Machine Learning (ML) techniques to alleviate those challenges. We provide the context and motivation for applying ML to each step of the…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-10-28 Azita Nouri , Philip E. Davis , Pradeep Subedi , Manish Parashar

Exascale computers will offer transformative capabilities to combine data-driven and learning-based approaches with traditional simulation applications to accelerate scientific discovery and insight. These software combinations and…

Workflows in biomolecular science are very important as they are intricately intertwined with the scientific outcomes, as well as algorithmic and methodological innovations. The use and effectiveness of workflow tools to meet the needs of…

Software Engineering · Computer Science 2019-05-29 Levi N. Naden , Sam Ellis , Shantenu Jha

The collaborative efforts of large communities in science experiments, often comprising thousands of global members, reflect a monumental commitment to exploration and discovery. Recently, advanced and complex data processing has gained…

This paper tries to reduce the effort of learning, deploying, and integrating several frameworks for the development of e-Science applications that combine simulations with High-Performance Data Analytics (HPDA). We propose a way to extend…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-07-10 Cristian Ramon-Cortes , Francesc Lordan , Jorge Ejarque , Rosa M. Badia

A computational workflow, also known as workflow, consists of tasks that must be executed in a specific order to attain a specific goal. Often, in fields such as biology, chemistry, physics, and data science, among others, these workflows…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-06-14 George Papadimitriou , Hongwei Jin , Cong Wang , Rajiv Mayani , Krishnan Raghavan , Anirban Mandal , Prasanna Balaprakash , Ewa Deelman

Motivation: Complex computational pipelines are becoming a staple of modern scientific research. Often these pipelines are resource intensive and require days of computing time. In such cases, it makes sense to run them over distributed…

Software Engineering · Computer Science 2015-01-28 David K. Brown , Thommas M. Musyoka , David L. Penkler , Özlem Tastan Bishop

Scientific workflow management systems offer features for composing complex computational pipelines from modular building blocks, for executing the resulting automated workflows, and for recording the provenance of data products resulting…

The increasing availability of cloud computing services for science has changed the way scientific code can be developed, deployed, and run. Many modern scientific workflows are capable of running on cloud computing resources. Consequently,…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-11 Peter Vaillancourt , Bennett Wineholt , Brandon Barker , Plato Deliyannis , Jackie Zheng , Akshay Suresh , Adam Brazier , Rich Knepper , Rich Wolski

In the AI-for-science era, scientific computing scenarios such as concurrent learning and high-throughput computing demand a new generation of infrastructure that supports scalable computing resources and automated workflow management on…

Virtual e-Science infrastructures supporting Web-based scientific workflows are an example for knowledge-intensive collaborative and weakly-structured processes where the interaction with the human scientists during process execution plays…

Artificial Intelligence · Computer Science 2010-12-09 Adrian Paschke , Zhili Zhao

A workflow describes the entirety of processing steps in an analysis, such as employed in many fields of physics. Workflow management makes the dependencies between individual steps of a workflow and their computational requirements…

Data Analysis, Statistics and Probability · Physics 2023-09-15 Caspar Schmitt , Boyang Yu , Thomas Kuhr

The role of scalable high-performance workflows and flexible workflow management systems that can support multiple simulations will continue to increase in importance. For example, with the end of Dennard scaling, there is a need to…

Software Engineering · Computer Science 2017-10-19 Jay Jay Billings , Shantenu Jha

In this paper, we propose an architecture for a security-aware workflow management system (WfMS) we call SecFlow in answer to the recent developments of combining workflow management systems with Cloud environments and the still lacking…

Cryptography and Security · Computer Science 2023-07-12 Nafiseh Soveizi , Fatih Turkmen

This paper describes a vision and work in progress to elevate network resources and data transfer management to the same level as compute and storage in the context of services access, scheduling, life cycle management, and orchestration.…

Networking and Internet Architecture · Computer Science 2022-03-22 Tom Lehman , Xi Yang , Chin Guok , Frank Wuerthwein , Igor Sfiligoi , John Graham , Aashay Arora , Dima Mishin , Diego Davila , Jonathan Guiang , Tom Hutton , Harvey Newman , Justas Balcas

Scientific research in many fields routinely requires the analysis of large datasets, and scientists often employ workflow systems to leverage clusters of computers for their data analysis. However, due to their size and scale, these…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-06-05 Lauritz Thamsen , Yehia Elkhatib , Paul Harvey , Syed Waqar Nabi , Jeremy Singer , Wim Vanderbauwhede