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Compartmental epidemic models with dynamics that evolve over a graph network have gained considerable importance in recent years but analysis of these models is in general difficult due to their complexity. In this paper, we develop two…

Populations and Evolution · Quantitative Biology 2023-05-31 Sei Zhen Khong , Lanlan Su

The random graph of Erdos and Renyi is one of the oldest and best studied models of a network, and possesses the considerable advantage of being exactly solvable for many of its average properties. However, as a model of real-world networks…

Statistical Mechanics · Physics 2007-05-23 M. E. J. Newman

Knowledge networks have become increasingly important as a changing repository of data which can be represented, studied and modeled by using complex networks concepts and methodologies. Here we report a study of knowledge networks…

Physics and Society · Physics 2023-06-29 Eric K. Tokuda , Renaud Lambiotte , Luciano da F. Costa

The scale-free model of Barabasi and Albert gave rise to a burst of activity in the field of complex networks. In this paper, we revisit one of the main assumptions of the model, the preferential attachment rule. We study a model in which…

Statistical Mechanics · Physics 2009-11-10 Jesus Gomez-Gardenes , Yamir Moreno

Barab\'asi-Albert's `Scale Free' model is the starting point for much of the accepted theory of the evolution of real world communication networks. Careful comparison of the theory with a wide range of real world networks, however,…

Physics and Society · Physics 2017-09-11 Philip Tee , Ian Wakeman , George Parisis , Jonathan Dawes , István Z. Kiss

Knowledge graph completion aims to predict the new links in given entities among the knowledge graph (KG). Most mainstream embedding methods focus on fact triplets contained in the given KG, however, ignoring the rich background information…

Artificial Intelligence · Computer Science 2020-10-13 Zhaochong An , Bozhou Chen , Houde Quan , Qihui Lin , Hongzhi Wang

The Random Geometric Graph (RGG) is a random graph model for network data with an underlying spatial representation. Geometry endows RGGs with a rich dependence structure and often leads to desirable properties of real-world networks such…

Social and Information Networks · Computer Science 2022-08-25 Quentin Duchemin , Yohann de Castro

This study presents a neural network-enhanced approach to modeling disease spread dynamics over time and space. Neural networks are used to estimate time-varying parameters, with two calibration methods explored: Approximate Bayesian…

Quantitative Methods · Quantitative Biology 2024-10-29 Randy L. Caga-anan

Scientific knowledge cannot be seen as a set of isolated fields, but as a highly connected network. Understanding how research areas are connected is of paramount importance for adequately allocating funding and human resources (e.g.,…

Digital Libraries · Computer Science 2021-04-09 Francisco Galuppo Azevedo , Fabricio Murai

Multilayer network science has emerged as a central framework for analysing interconnected and interdependent complex systems. Its relevance has grown substantially with the increasing availability of rich, heterogeneous data, which makes…

This research establishes that many real-world networks exhibit bounded expansion, a strong notion of structural sparsity, and demonstrates that it can be leveraged to design efficient algorithms for network analysis. We analyze several…

Social and Information Networks · Computer Science 2018-10-15 Erik D. Demaine , Felix Reidl , Peter Rossmanith , Fernando Sanchez Villaamil , Somnath Sikdar , Blair D. Sullivan

Many networks contain correlations and often conventional analysis is incapable of incorporating this often essential feature. In arXiv:0708.2176, we introduced the link-space formalism for analysing degree-degree correlations in evolving…

Physics and Society · Physics 2008-02-06 David M. D. Smith , Chiu Fan Lee , Neil F. Johnson , Jukka-Pekka Onnela

Graph neural networks (GNNs) have shown promising performance for knowledge graph reasoning. A recent variant of GNN called progressive relational graph neural network (PRGNN), utilizes relational rules to infer missing knowledge in…

Computation and Language · Computer Science 2023-10-23 Shuhan Wu , Huaiyu Wan , Wei Chen , Yuting Wu , Junfeng Shen , Youfang Lin

Graphs and complex networks can be successively separated into connected components associated to respective seed nodes, therefore establishing a respective hierarchical organization. In the present work, we study the properties of the…

Physics and Society · Physics 2024-03-27 Alexandre Benatti , Luciano da F. Costa

Heterogeneous molecular entities and their interactions, commonly depicted as a network, are crucial for advancing our systems-level understanding of biology. With recent advancements in high-throughput data generation and a significant…

Quantitative Methods · Quantitative Biology 2026-03-18 Kishan KC , Rui Li , Paribesh Regmi , Anne R. Haake

Many real-world networks of interest are embedded in physical space. We present a new random graph model aiming to reflect the interplay between the geometries of the graph and of the underlying space. The model favors configurations with…

Probability · Mathematics 2017-06-14 Jean-Christophe Mourrat , Daniel Valesin

Random graph models are important constructs for data analytic applications as well as pure mathematical developments, as they provide capabilities for network synthesis and principled analysis. Several models have been developed with the…

Social and Information Networks · Computer Science 2018-08-06 Omar El-daghar , Erik Lundberg , Robert A. Bridges

The ability to sample random networks that can accurately represent real social contact networks is essential to the study of viral epidemics. The Barab\'asi-Albert model and its extensions attempt to capture reality by generating networks…

Physics and Society · Physics 2018-10-26 Niema Moshiri

We define a dynamic model of random networks, where new vertices are connected to old ones with a probability proportional to a sublinear function of their degree. We first give a strong limit law for the empirical degree distribution, and…

Probability · Mathematics 2008-07-31 Steffen Dereich , Peter Morters

Exponential random graph models (ERGMs), also known as p* models, have been utilized extensively in the social science literature to study complex networks and how their global structure depends on underlying structural components. However,…

Applications · Statistics 2015-05-19 Sean L. Simpson , Satoru Hayasaka , Paul J. Laurienti