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We study the family of network models derived by requiring the expected properties of a graph ensemble to match a given set of measurements of a real-world network, while maximizing the entropy of the ensemble. Models of this type play the…

Statistical Mechanics · Physics 2009-11-10 Juyong Park , M. E. J. Newman

Small-world architectures may be implicated in a range of phenomena from disease propagation to networks of neurons in the cerebral cortex. While most of the recent attention on small-world networks has focussed on the effect of introducing…

Disordered Systems and Neural Networks · Physics 2007-05-23 Rajesh Kasturirangan

The rapidly developing theory of complex networks indicates that real networks are not random, but have a highly robust large-scale architecture, governed by strict organizational principles. Here, we focus on the properties of biological…

Molecular Networks · Quantitative Biology 2007-05-23 E. Almaas , A. -L. Barabasi

Social networks have been of much interest in recent years. We here focus on a network structure derived from co-occurrences of people in traditional newspaper media. We find three clear deviations from what can be expected in a random…

Physics and Society · Physics 2016-07-14 V. A. Traag , R. Reinanda , G. van Klinken

In this paper, we explore the reduction of functionality in a complex system as a consequence of cumulative random damage and imperfect reparation, a phenomenon modeled as a dynamical process on networks. We analyze the global…

Statistical Mechanics · Physics 2021-06-07 L. K. Eraso-Hernandez , A. P. Riascos , T. M. Michelitsch , J. Wang-Michelitsch

This article explores the relationship between communities and short cycles in complex networks, based on the fact that nodes more densely connected amongst one another are more likely to be linked through short cycles. By identifying…

Disordered Systems and Neural Networks · Physics 2007-05-23 James Bagrow , Erik Bollt , Luciano da F. Costa

We investigate the impact of borders on the topology of spatially embedded networks. Indeed territorial subdivisions and geographical borders significantly hamper the geographical span of networks thus playing a key role in the formation of…

Physics and Society · Physics 2014-04-04 Federica Cerina , Alessandro Chessa , Fabio Pammolli , Massimo Riccaboni

Most random graph models are locally tree-like - do not contain short cycles - rendering them unfit for modeling networks with a community structure. We introduce the hierarchical configuration model (HCM), a generalization of the…

Physics and Society · Physics 2016-07-12 Clara Stegehuis , Remco van der Hofstad , Johan S. H. van Leeuwaarden

Many real-world networks have high clustering among vertices: vertices that share neighbors are often also directly connected to each other. A network's clustering can be a useful indicator of its connectedness and community structure.…

Social and Information Networks · Computer Science 2018-04-12 Jeff Alstott , Christine Klymko , Pamela B. Pyzza , Mary Radcliffe

We study a class models of correlated random networks in which vertices are characterized by \textit{hidden variables} controlling the establishment of edges between pairs of vertices. We find analytical expressions for the main topological…

Disordered Systems and Neural Networks · Physics 2009-11-10 Marian Boguna , Romualdo Pastor-Satorras

Finding the common structural brain connectivity network for a given population is an open problem, crucial for current neuro-science. Recent evidence suggests there's a tightly connected network shared between humans. Obtaining this…

Neurons and Cognition · Quantitative Biology 2017-01-10 Nahuel Lascano , Guillermo Gallardo , Rachid Deriche , Dorian Mazauric , Demian Wassermann

Biology presents many examples of planar distribution and structural networks having dense sets of closed loops. An archetype of this form of network organization is the vasculature of dicotyledonous leaves, which showcases a…

Quantitative Methods · Quantitative Biology 2015-05-30 Eleni Katifori , Marcelo O. Magnasco

Seeking effective neural networks is a critical and practical field in deep learning. Besides designing the depth, type of convolution, normalization, and nonlinearities, the topological connectivity of neural networks is also important.…

Computer Vision and Pattern Recognition · Computer Science 2020-08-20 Kun Yuan , Quanquan Li , Jing Shao , Junjie Yan

One of the most prominent properties in real-world networks is the presence of a community structure, i.e. dense and loosely interconnected groups of nodes called communities. In an attempt to better understand this concept, we study the…

Social and Information Networks · Computer Science 2012-08-16 Günce Keziban Orman , Vincent Labatut , Hocine Cherifi

The behavior of complex systems is determined not only by the topological organization of their interconnections but also by the dynamical processes taking place among their constituents. A faithful modeling of the dynamics is essential…

Physics and Society · Physics 2015-05-20 R. Lambiotte , R. Sinatra , J. -C. Delvenne , T. S. Evans , M. Barahona , V. Latora

Systems as diverse as genetic networks or the world wide web are best described as networks with complex topology. A common property of many large networks is that the vertex connectivities follow a scale-free power-law distribution. This…

Disordered Systems and Neural Networks · Physics 2015-06-25 Albert-Laszlo Barabasi , Reka Albert

Random network models play a prominent role in modeling, analyzing and understanding complex phenomena on real-life networks. However, a key property of networks is often neglected: many real-world networks exhibit spatial structure, the…

Quantitative Methods · Quantitative Biology 2017-02-07 John Lang , Hans De Sterck , Jamieson L. Kaiser , Joel C. Miller

The failure of a single link can degrade the operation of a supply network up to the point of complete collapse. Yet, the interplay between network topology and locality of the response to such damage is poorly understood. Here, we study…

Physics and Society · Physics 2019-05-22 Julius Strake , Franz Kaiser , Farnaz Basiri , Henrik Ronellenfitsch , Dirk Witthaut

Community detection and edge prediction are both forms of link mining: they are concerned with discovering the relations between vertices in networks. Some of the vertex similarity measures used in edge prediction are closely related to the…

Physics and Society · Physics 2015-06-03 Bowen Yan , Steve Gregory

This article describes the application of recently introduced complex networks concepts and methods to the characterization and analysis of cortical bone structure. Three-dimensional reconstructions of the system of channels underlying bone…

Tissues and Organs · Quantitative Biology 2007-05-23 Luciano da Fontoura Costa , Matheus Palhares Viana , Marcelo Emilio Beletti