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High fidelity Computational Fluid Dynamics simulations are generally associated with large computing requirements, which are progressively acute with each new generation of supercomputers. However, significant research efforts are required…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-07-07 R. Borrell , D. Dosimont , M. Garcia-Gasulla , G. Houzeaux , O. Lehmkuhl , V. Mehta , H. Owen , M. Vazquez , G. Oyarzun

We present a parallel algorithm for calculating very large determinants with arbitrary precision on computer clusters. This algorithm minimises data movements between the nodes and computes not only the determinant but also all minors…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-10-26 Gleb Beliakov , Yuri Matiyasevich

Many appplications in computational science are sufficiently compute-intensive that they depend on the power of parallel computing for viability. For all but the "embarrassingly parallel" problems, the performance depends upon the level of…

High Energy Physics - Lattice · Physics 2009-09-29 Z. Sroczynski , N. Eicker , Th. Lippert , B. Orth , K. Schilling

It is demonstrated how the non-proprietary OpenACC standard of compiler directives may be used to compactly and efficiently accelerate the rate-determining steps of two of the most routinely applied many-body methods of electronic structure…

Chemical Physics · Physics 2017-09-15 Janus Juul Eriksen

Coupled cluster theory is a vital cornerstone of electronic structure theory and is being applied to ever-larger systems. Stochastic approaches to quantum chemistry have grown in importance and offer compelling advantages over traditional…

We present a new adaptive parallel algorithm for the challenging problem of multi-dimensional numerical integration on massively parallel architectures. Adaptive algorithms have demonstrated the best performance, but efficient many-core…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-06-24 Ioannis Sakiotis , Kamesh Arumugam , Marc Paterno , Desh Ranjan , Balša Terzić , Mohammad Zubair

The predominance of Kohn-Sham density functional theory (KS-DFT) for the theoretical treatment of large experimentally relevant systems in molecular chemistry and materials science relies primarily on the existence of efficient software…

Computational Physics · Physics 2020-07-08 David B. Williams-Young , Wibe A. de Jong , Hubertus J. J. van Dam , Chao Yang

As the need for computational power and efficiency rises, parallel systems become increasingly popular among various scientific fields. While multiple core-based architectures have been the center of attention for many years, the rapid…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-06-11 E. I. Ioannidis , N. Cheimarios , A. N. Spyropoulos , A. G. Boudouvis

As multicore systems continue to gain ground in the High Performance Computing world, linear algebra algorithms have to be reformulated or new algorithms have to be developed in order to take advantage of the architectural features on these…

Numerical Analysis · Mathematics 2008-08-12 Alfredo Buttari , Julien Langou , Jakub Kurzak , Jack Dongarra

We present the implementation of a trust-region Newton algorithm ExaTron for bound-constrained nonlinear programming problems, fully running on multiple GPUs. Without data transfers between CPU and GPU, our implementation has achieved the…

Optimization and Control · Mathematics 2021-06-30 Youngdae Kim , François Pacaud , Kibaek Kim , Mihai Anitescu

We give an overview of the theoretical results for matrix block-recursive algorithms in commutative domains and present the results of experiments that we conducted with new parallel programs based on these algorithms on a supercomputer…

Symbolic Computation · Computer Science 2019-03-12 Gennadi Malaschonok , Evgeni Ilchenko

One of the challenges of high granularity calorimeters, such as that to be built to cover the endcap region in the CMS Phase-2 Upgrade for HL-LHC, is that the large number of channels causes a surge in the computing load when clustering…

Instrumentation and Detectors · Physics 2020-01-29 Marco Rovere , Ziheng Chen , Antonio Di Pilato , Felice Pantaleo , Chris Seez

Furthering our understanding of many of today's interesting problems in plasma physics---including plasma based acceleration and magnetic reconnection with pair production due to quantum electrodynamic effects---requires large-scale kinetic…

Computational Physics · Physics 2020-10-28 Kyle G. Miller , Roman P. Lee , Adam Tableman , Anton Helm , Ricardo A. Fonseca , Viktor K. Decyk , Warren B. Mori

This paper discusses efficient parallel algorithms for obtaining strong lower bounds and exact solutions for large instances of the Quadratic Assignment Problem (QAP). Our parallel architecture is comprised of both multi-core processors and…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-10-11 Ketan Date , Rakesh Nagi

Recent applications in the domain of near-sensor computing require the adoption of floating-point arithmetic to reconcile high precision results with a wide dynamic range. In this paper, we propose a multi-core computing cluster that…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-06-12 Fabio Montagna , Stefan Mach , Simone Benatti , Angelo Garofalo , Gianmarco Ottavi , Luca Benini , Davide Rossi , Giuseppe Tagliavini

This paper presents an accurate density computation approach for large dark matter simulations, based on a recently introduced phase-space tessellation technique and designed for massively parallel, heterogeneous cluster architectures. We…

Computational Physics · Physics 2017-08-28 Ralf Kaehler

Graph clustering has many important applications in computing, but due to growing sizes of graphs, even traditionally fast clustering methods such as spectral partitioning can be computationally expensive for real-world graphs of interest.…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-06-11 Julian Shun , Farbod Roosta-Khorasani , Kimon Fountoulakis , Michael W. Mahoney

Computation of a signal's estimated covariance matrix is an important building block in signal processing, e.g., for spectral estimation. Each matrix element is a sum of products of elements in the input matrix taken over a sliding window.…

Data Structures and Algorithms · Computer Science 2013-03-12 Oded Green , Lior David , Ami Galperin , Yitzhak Birk

The physics programme of the LHCb experiment at the Large Hadron Collider requires an efficient and precise reconstruction of the particle collision vertices. The LHCb Upgrade detector relies on a fully software-based trigger with an online…

Current computational systems are heterogeneous by nature, featuring a combination of CPUs and GPUs. As the latter are becoming an established platform for high-performance computing, the focus is shifting towards the seamless programming…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-10-23 Fábio Soldado , Fernando Alexandre , Hervé Paulino