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Related papers: Does the Magic of BERT Apply to Medical Code Assig…

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Clinical notes contain an extensive record of a patient's health status, such as smoking status or the presence of heart conditions. However, this detail is not replicated within the structured data of electronic health systems.…

Computation and Language · Computer Science 2020-09-18 Andriy Mulyar , Elliot Schumacher , Masoud Rouhizadeh , Mark Dredze

Pretraining large neural language models, such as BERT, has led to impressive gains on many natural language processing (NLP) tasks. However, most pretraining efforts focus on general domain corpora, such as newswire and Web. A prevailing…

Computation and Language · Computer Science 2021-09-20 Yu Gu , Robert Tinn , Hao Cheng , Michael Lucas , Naoto Usuyama , Xiaodong Liu , Tristan Naumann , Jianfeng Gao , Hoifung Poon

While deep learning techniques have shown promising results in many natural language processing (NLP) tasks, it has not been widely applied to the clinical domain. The lack of large datasets and the pervasive use of domain-specific language…

Computation and Language · Computer Science 2019-06-20 Jiin Nam , Seunghyun Yoon , Kyomin Jung

Medical coding, the translation of unstructured clinical text into standardized medical codes, is a crucial but time-consuming healthcare practice. Though large language models (LLM) could automate the coding process and improve the…

Computation and Language · Computer Science 2025-03-25 John Wu , David Wu , Jimeng Sun

The field of natural language processing (NLP) has made significant progress with the rapid development of deep learning technologies. One of the research directions in text sentiment analysis is sentiment analysis of medical texts, which…

Computation and Language · Computer Science 2024-12-04 Yinan Chen

Multilingual pretrained language models (such as multilingual BERT) have achieved impressive results for cross-lingual transfer. However, due to the constant model capacity, multilingual pre-training usually lags behind the monolingual…

Computation and Language · Computer Science 2019-11-12 Zewen Chi , Li Dong , Furu Wei , Xian-Ling Mao , Heyan Huang

This work presents biomedical and clinical language models for Spanish by experimenting with different pretraining choices, such as masking at word and subword level, varying the vocabulary size and testing with domain data, looking for…

Biomedical text mining is becoming increasingly important as the number of biomedical documents and web data rapidly grows. Recently, word representation models such as BERT has gained popularity among researchers. However, it is difficult…

Computation and Language · Computer Science 2023-01-26 Ningyu Zhang , Qianghuai Jia , Kangping Yin , Liang Dong , Feng Gao , Nengwei Hua

This paper achieves state of the art results for the ICD code prediction task using the MIMIC-III dataset. This was achieved through the use of Clinical BERT (Alsentzer et al., 2019). embeddings and text augmentation and label balancing to…

Computation and Language · Computer Science 2020-08-25 Brent Biseda , Gaurav Desai , Haifeng Lin , Anish Philip

Previous work on document-level NMT usually focuses on limited contexts because of degraded performance on larger contexts. In this paper, we investigate on using large contexts with three main contributions: (1) Different from previous…

Computation and Language · Computer Science 2019-11-11 Liangyou Li , Xin Jiang , Qun Liu

Recently, the development of pre-trained language models has brought natural language processing (NLP) tasks to the new state-of-the-art. In this paper we explore the efficiency of various pre-trained language models. We pre-train a list of…

Computation and Language · Computer Science 2023-07-27 Tong Guo

The emerging classical-quantum transfer learning paradigm has brought a decent performance to quantum computational models in many tasks, such as computer vision, by enabling a combination of quantum models and classical pre-trained neural…

Quantum Physics · Physics 2023-02-28 Qiuchi Li , Benyou Wang , Yudong Zhu , Christina Lioma , Qun Liu

Background Clinical studies using real-world data may benefit from exploiting clinical reports, a particularly rich albeit unstructured medium. To that end, natural language processing can extract relevant information. Methods based on…

Computation and Language · Computer Science 2022-07-27 Basile Dura , Charline Jean , Xavier Tannier , Alice Calliger , Romain Bey , Antoine Neuraz , Rémi Flicoteaux

Recently, many pre-trained language models for source code have been proposed to model the context of code and serve as a basis for downstream code intelligence tasks such as code completion, code search, and code summarization. These…

Software Engineering · Computer Science 2022-02-15 Yao Wan , Wei Zhao , Hongyu Zhang , Yulei Sui , Guandong Xu , Hai Jin

Pre-training by language modeling has become a popular and successful approach to NLP tasks, but we have yet to understand exactly what linguistic capacities these pre-training processes confer upon models. In this paper we introduce a…

Computation and Language · Computer Science 2020-07-14 Allyson Ettinger

Medical code assignment, which predicts medical codes from clinical texts, is a fundamental task of intelligent medical information systems. The emergence of deep models in natural language processing has boosted the development of…

Computation and Language · Computer Science 2021-09-27 Shaoxiong Ji , Erik Cambria , Pekka Marttinen

This paper investigates the effectiveness of pre-training for few-shot intent classification. While existing paradigms commonly further pre-train language models such as BERT on a vast amount of unlabeled corpus, we find it highly effective…

Computation and Language · Computer Science 2024-09-17 Haode Zhang , Yuwei Zhang , Li-Ming Zhan , Jiaxin Chen , Guangyuan Shi , Albert Y. S. Lam , Xiao-Ming Wu

Natural language tasks like Named Entity Recognition (NER) in the clinical domain on non-English texts can be very time-consuming and expensive due to the lack of annotated data. Cross-lingual transfer (CLT) is a way to circumvent this…

Computation and Language · Computer Science 2023-06-08 Xavier Fontaine , Félix Gaschi , Parisa Rastin , Yannick Toussaint

Clinical interactions are initially recorded and documented in free text medical notes. ICD coding is the task of classifying and coding all diagnoses, symptoms and procedures associated with a patient's visit. The process is often manual…

Information Retrieval · Computer Science 2020-06-09 Zachariah Zhang , Jingshu Liu , Narges Razavian

This paper addresses the challenges posed by the unstructured nature and high-dimensional semantic complexity of electronic health record texts. A deep learning method based on attention mechanisms is proposed to achieve unified modeling…

Computation and Language · Computer Science 2025-07-03 Ting Xu , Xiaoxiao Deng , Xiandong Meng , Haifeng Yang , Yan Wu