Related papers: Knowledge-based Extraction of Cause-Effect Relatio…
Linking biomedical entities is an essential aspect in biomedical natural language processing tasks, such as text mining and question answering. However, a difficulty of linking the biomedical entities using current large language models…
Nature has inspired various ground-breaking technological developments in applications ranging from robotics to aerospace engineering and the manufacturing of medical devices. However, accessing the information captured in scientific…
Background: The detection and extraction of causality from natural language sentences have shown great potential in various fields of application. The field of requirements engineering is eligible for multiple reasons: (1) requirements…
Relation Extraction (RE) aims to label relations between groups of marked entities in raw text. Most current RE models learn context-aware representations of the target entities that are then used to establish relation between them. This…
Relation Extraction (RE) is a fundamental task of information extraction, which has attracted a large amount of research attention. Previous studies focus on extracting the relations within a sentence or document, while currently…
In recent years, there has been an increasing number of frameworks developed for biomedical entity and relation extraction. This research effort aims to address the accelerating growth in biomedical publications and the intricate nature of…
Multimodal conversation, a crucial form of human communication, carries rich emotional content, making the exploration of the causes of emotions within it a research endeavor of significant importance. However, existing research on the…
Temporal information extraction from unstructured text is essential for contextualizing events and deriving actionable insights, particularly in the medical domain. We address the task of extracting clinical events and their temporal…
This paper focuses on the problem of unsupervised relation extraction. Existing probabilistic generative model-based relation extraction methods work by extracting sentence features and using these features as inputs to train a generative…
Evidence-based medicine, the practice in which healthcare professionals refer to the best available evidence when making decisions, forms the foundation of modern healthcare. However, it relies on labour-intensive systematic reviews, where…
Owing to the exponential rise in the electronic medical records, information extraction in this domain is becoming an important area of research in recent years. Relation extraction between the medical concepts such as medical problem,…
We introduce a biomedical information extraction (IE) pipeline that extracts biological relationships from text and demonstrate that its components, such as named entity recognition (NER) and relation extraction (RE), outperform…
Contextual information is widely considered for NLP and knowledge discovery in life sciences since it highly influences the exact meaning of natural language. The scientific challenge is not only to extract such context data, but also to…
Using different sources of information to support automated extracting of relations between biomedical concepts contributes to the development of our understanding of biological systems. The primary comprehensive source of these relations…
Large Language Models (LLMs) with reasoning capabilities have recently demonstrated strong potential in medical Question Answering (QA). Existing approaches are largely English-focused and primarily rely on distillation from general-purpose…
Event Argument extraction refers to the task of extracting structured information from unstructured text for a particular event of interest. The existing works exhibit poor capabilities to extract causal event arguments like Reason and…
Biomedical entity linking maps textual mentions to concepts in structured knowledge bases such as UMLS or SNOMED CT. Most existing systems link each mention independently, using only the mention or its surrounding sentence. This ignores…
The COVID-19 pandemic has spawned a diverse body of scientific literature that is challenging to navigate, stimulating interest in automated tools to help find useful knowledge. We pursue the construction of a knowledge base (KB) of…
Industry-wide nuclear power plant operating experience is a critical source of raw data for performing parameter estimations in reliability and risk models. Much operating experience information pertains to failure events and is stored as…
In recent years, biomedical event extraction has been dominated by complicated pipeline and joint methods, which need to be simplified. In addition, existing work has not effectively utilized trigger word information explicitly. Hence, we…