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The paper extends and enhances in several ways the recently proposed homogenization theory of metamaterials [J. Opt. Soc. Am. B 28, 577 (2011)]. The theory is based on a direct analysis of fields in the lattice cells rather than on an…

Mesoscale and Nanoscale Physics · Physics 2011-06-17 Igor Tsukerman

We present and analyse a model for cell signalling processes in biological tissues. The model includes diffusion and nonlinear reactions on the cell surfaces, and both inter- and intracellular signalling. Using techniques from the theory of…

Analysis of PDEs · Mathematics 2020-03-12 Mariya Ptashnyk , Chandrasekhar Venkataraman

Endocytosis underlies many cellular functions including signaling and nutrient uptake. The endocytosed cargo gets redistributed across a dynamic network of endosomes undergoing fusion and fission. Here, a theoretical approach is reviewed…

Subcellular Processes · Quantitative Biology 2014-12-04 Lionel Foret , Lutz Brusch , Frank Jülicher

Hydroxide ion transport in anion-exchange membranes fundamentally limits the efficiency of alkaline water electrolysis for green hydrogen production, yet the atomic-scale transport mechanisms remain poorly understood due to the…

Digestion in the small intestine is the result of complex mechanical and biological phenomena which can be modelled at different scales. In a previous article, we introduced a system of ordinary differential equations for describing the…

Analysis of PDEs · Mathematics 2011-09-12 Masoomeh Taghipoor , Guy Barles , Christine Georgelin , Jean-René Licois , Philippe Lescoat

The paper presents a new type of weakly nonlinear two-scale model of inflatable periodic poroelastic structures saturated by Newtonian fluids. The periodic microstructures incorporate fluid inclusions connected to the fluid channels by…

Analysis of PDEs · Mathematics 2025-08-28 Eduard Rohan , Vladimír Lukeš

We carry out the homogenization of a fluid-structure interaction problem consisting in the periodic inclusions of a viscous fluid in an elastic body. We get a macrostructure model where the body behaves as a viscoelastic material with a…

Analysis of PDEs · Mathematics 2024-05-20 Juan Casado-Díaz

Here homogenization theory is used to establish a connection between the symmetries of a periodic elastic structure associated with the microscopic properties of an elastic material and the material symmetries of the effective, macroscopic…

Mathematical Physics · Physics 2015-12-29 Mariya Ptashnyk , Brian Seguin

Bioelectrochemical systems are electrochemical cells that rely on conductive biofilms covering an electrode. We consider the example of a microbial fuel cell, and we derive a dynamic model of ion transport, biochemical reactions and…

The paper addresses the homogenization of a micro-model of poroelasticity coupled with thermal effects for two-constituent media and with imperfect interfacial contact.The homogenized model is obtained by means of the two-scale convergence…

Analysis of PDEs · Mathematics 2021-12-07 Abdelhamid Ainouz

In this paper, we discuss a general framework for multicontinuum homogenization. Multicontinuum models are widely used in many applications and some derivations for these models are established. In these models, several macroscopic…

Numerical Analysis · Mathematics 2023-09-18 E. Chung , Y. Efendiev , J. Galvis , W. T. Leung

Many cellular processes rely on the cell's ability to transport material to and from the nucleus. Networks consisting of many microtubules and actin filaments are key to this transport. Recently, the inhibition of intracellular transport…

Subcellular Processes · Quantitative Biology 2020-05-06 Shawn D. Ryan , Zachary McCarthy , Mykhailo Potomkin

In this paper we present a derivation and multiscale analysis of a mathematical model for plant cell wall biomechanics that takes into account both the microscopic structure of a cell wall coming from the cellulose microfibrils and the…

Analysis of PDEs · Mathematics 2016-01-01 Mariya Ptashnyk , Brian Seguin

Asymptotic homogenisation is used to systematically derive reduced-order macroscopic models of conductive behaviour in spirally-wound layered materials in which the layers have very different conductivities. The problem is motivated by the…

Applied Physics · Physics 2020-11-10 Steven Psaltis , Robert Timms , Colin Please , S. Jonathan Chapman

We study charge transport in an ionic solution in a confined nanoscale geometry in the presence of an externally applied electric field and immobile background charges. For a range of parameters, the ion current shows non-monotonic behavior…

Statistical Mechanics · Physics 2015-05-13 Punyabrata Pradhan , Yariv Kafri , Dov Levine

The paper presents a new type of weakly nonlinear two-scale model of controllable periodic porous piezoelectric structures saturated by Newtonian fluids. The flow is propelled by peristaltic deformation of microchannels which is induced due…

Analysis of PDEs · Mathematics 2024-07-18 Eduard Rohan , Vladimír Lukeš

Many living and physical systems such as cell aggregates, tissues or bacterial colonies behave as unconventional systems of particles that are strongly constrained by volume exclusion and shape interactions. Understanding how these…

Quantitative Methods · Quantitative Biology 2026-05-20 Antoine Diez , Jean Feydy

The paper is devoted to the homogenization of porous piezoelectric materials saturated by electrically inert fluid. The solid part of a representative volume element consists of the piezoelectric skeleton with embedded conductors. The pore…

Computational Physics · Physics 2018-08-01 Eduard Rohan , Vladimír Lukeš

The application of single-cell molecular profiling coupled with spatial technologies has enabled charting cellular heterogeneity in reference tissues and in disease. This new wave of molecular data has highlighted the expected diversity of…

Tissues and Organs · Quantitative Biology 2024-03-12 Ricardo Omar Ramirez Flores , Philipp Sven Lars Schäfer , Leonie Küchenhoff , Julio Saez-Rodriguez

Intracellular transport processes are essential to the healthy development of many organisms as well as more generally to healthy cellular function. The complex dynamics and interactions between protein molecules and filaments on different…

Dynamical Systems · Mathematics 2022-07-27 Maria-Veronica Ciocanel