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Deep learning algorithms have become the golden standard for segmentation of medical imaging data. In most works, the variability and heterogeneity of real clinical data is acknowledged to still be a problem. One way to automatically…

Image and Video Processing · Electrical Eng. & Systems 2022-02-25 Arkadiy Dushatskiy , Gerry Lowe , Peter A. N. Bosman , Tanja Alderliesten

Missing data is a common problem in machine learning and in retrospective imaging research it is often encountered in the form of missing imaging modalities. We propose to take into account missing modalities in the design and training of…

Computer Vision and Pattern Recognition · Computer Science 2019-09-26 Karin van Garderen , Marion Smits , Stefan Klein

We consider the problem of segmenting a biomedical image into anatomical regions of interest. We specifically address the frequent scenario where we have no paired training data that contains images and their manual segmentations. Instead,…

Computer Vision and Pattern Recognition · Computer Science 2019-03-14 Adrian V. Dalca , John Guttag , Mert R. Sabuncu

Medical imaging is key in modern medicine. From magnetic resonance imaging (MRI) to microscopic imaging for blood cell detection, diagnostic medical imaging reveals vital insights into patient health. To predict diseases or provide…

Cryptography and Security · Computer Science 2025-05-26 Anika Hannemann , Arjhun Swaminathan , Ali Burak Ünal , Mete Akgün

Recent advances in machine learning, particularly in Natural Language Processing (NLP), have produced powerful models trained on vast datasets. However, these models risk leaking sensitive information, raising privacy concerns. In response,…

Machine Learning · Computer Science 2025-09-19 Haoyu Tang , Ye Liu , Xi Zhao , Xukai Liu , Yanghai Zhang , Kai Zhang , Xiaofang Zhou , Enhong Chen

We propose a novel teacher-student model for semi-supervised multi-organ segmentation. In teacher-student model, data augmentation is usually adopted on unlabeled data to regularize the consistent training between teacher and student. We…

Computer Vision and Pattern Recognition · Computer Science 2023-04-07 Duowen Chen , Yunhao Bai , Wei Shen , Qingli Li , Lequan Yu , Yan Wang

Medical image segmentation remains challenging in low-data regimes, where scarce annotations often yield poor generalization and ambiguous boundaries with missing fine structures. Recent self-supervised pretraining has improved…

Computer Vision and Pattern Recognition · Computer Science 2026-05-15 Zhiquan Chen , Haitao Wang , Guowei Zou , Hejun Wu

As deep learning models are becoming larger and data-hungrier, there are growing ethical, legal and technical concerns over use of data: in practice, agreements on data use may change over time, rendering previously-used training data…

Machine Learning · Computer Science 2024-05-20 Nazanin Mohammadi Sepahvand , Vincent Dumoulin , Eleni Triantafillou , Gintare Karolina Dziugaite

Multimodal Magnetic Resonance Imaging (MRI) provides essential complementary information for analyzing brain tumor subregions. While methods using four common MRI modalities for automatic segmentation have shown success, they often face…

Image and Video Processing · Electrical Eng. & Systems 2024-11-14 Runze Cheng , Zhongao Sun , Ye Zhang , Chun Li

Recent studies on contrastive learning have achieved remarkable performance solely by leveraging few labels in the context of medical image segmentation. Existing methods mainly focus on instance discrimination and invariant mapping.…

Image and Video Processing · Electrical Eng. & Systems 2024-09-24 Chenyu You , Weicheng Dai , Fenglin Liu , Yifei Min , Nicha C. Dvornek , Xiaoxiao Li , David A. Clifton , Lawrence Staib , James S. Duncan

We work on the breast imaging malignancy segmentation task while focusing on the training process instead of network complexity. We designed a training process based on a modified U-Net, increasing the overall segmentation performances by…

Image and Video Processing · Electrical Eng. & Systems 2020-06-02 Mickael Tardy , Diana Mateus

With increasing applications of semantic segmentation, numerous datasets have been proposed in the past few years. Yet labeling remains expensive, thus, it is desirable to jointly train models across aggregations of datasets to enhance data…

Computer Vision and Pattern Recognition · Computer Science 2022-03-01 Dongwan Kim , Yi-Hsuan Tsai , Yumin Suh , Masoud Faraki , Sparsh Garg , Manmohan Chandraker , Bohyung Han

Accurate segmentation of the ventricles from cardiac magnetic resonance images (CMRIs) is crucial for enhancing the diagnosis and analysis of heart conditions. Deep learning-based segmentation methods have recently garnered significant…

Image and Video Processing · Electrical Eng. & Systems 2025-03-26 Hong Zheng , Yucheng Chen , Nan Mu , Xiaoning Li

Accurate image registration is essential in many medical imaging applications, yet most deep registration networks provide little indication of when or where their predictions are unreliable. Existing uncertainty estimation approaches, such…

Computer Vision and Pattern Recognition · Computer Science 2026-02-03 Lin Tian , Xiaoling Hu , Juan Eugenio Iglesias

Fluorescence microscopy images contain several channels, each indicating a marker staining the sample. Since many different marker combinations are utilized in practice, it has been challenging to apply deep learning based segmentation…

Computer Vision and Pattern Recognition · Computer Science 2021-01-28 Alvaro Gomariz , Raphael Egli , Tiziano Portenier , César Nombela-Arrieta , Orcun Goksel

Planning of radiotherapy involves accurate segmentation of a large number of organs at risk, i.e. organs for which irradiation doses should be minimized to avoid important side effects of the therapy. We propose a deep learning method for…

Image and Video Processing · Electrical Eng. & Systems 2019-07-04 Pawel Mlynarski , Hervé Delingette , Hamza Alghamdi , Pierre-Yves Bondiau , Nicholas Ayache

Though deep learning has achieved advanced performance recently, it remains a challenging task in the field of medical imaging, as obtaining reliable labeled training data is time-consuming and expensive. In this paper, we propose a…

Computer Vision and Pattern Recognition · Computer Science 2020-10-20 Yixin Wang , Yao Zhang , Jiang Tian , Cheng Zhong , Zhongchao Shi , Yang Zhang , Zhiqiang He

The proliferation of deep learning applications in healthcare calls for data aggregation across various institutions, a practice often associated with significant privacy concerns. This concern intensifies in medical image analysis, where…

Machine Learning · Computer Science 2023-07-03 Kishore Babu Nampalle , Pradeep Singh , Uppala Vivek Narayan , Balasubramanian Raman

We present two practical improvement techniques for unsupervised segmentation learning. These techniques address limitations in the resolution and accuracy of predicted segmentation maps of recent state-of-the-art methods. Firstly, we…

Computer Vision and Pattern Recognition · Computer Science 2024-12-02 Alp Eren Sari , Francesco Locatello , Paolo Favaro

Deep learning models trained on medical images from a source domain (e.g. imaging modality) often fail when deployed on images from a different target domain, despite imaging common anatomical structures. Deep unsupervised domain adaptation…

Image and Video Processing · Electrical Eng. & Systems 2019-08-14 Cheng Ouyang , Konstantinos Kamnitsas , Carlo Biffi , Jinming Duan , Daniel Rueckert