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Transformers have been extensively studied in medical image segmentation to build pairwise long-range dependence. Yet, relatively limited well-annotated medical image data makes transformers struggle to extract diverse global features,…

Image and Video Processing · Electrical Eng. & Systems 2023-09-13 Xian Lin , Zengqiang Yan , Xianbo Deng , Chuansheng Zheng , Li Yu

With the advancement of remote-sensed imaging large volumes of very high resolution land cover images can now be obtained. Automation of object recognition in these 2D images, however, is still a key issue. High intra-class variance and low…

Computer Vision and Pattern Recognition · Computer Science 2019-10-15 Vikas Agaradahalli Gurumurthy

The fast growing deep learning technologies have become the main solution of many machine learning problems for medical image analysis. Deep convolution neural networks (CNNs), as one of the most important branch of the deep learning…

Computer Vision and Pattern Recognition · Computer Science 2017-08-25 Zizhao Zhang , Fuyong Xing , Hai Su , Xiaoshuang Shi , Lin Yang

This article presents a convolutional neural network for the automatic segmentation of brain tumors in multimodal 3D MR images based on a U-net architecture.We evaluate the use of a densely connected convolutional network encoder (DenseNet)…

Computer Vision and Pattern Recognition · Computer Science 2018-11-20 Jean Stawiaski

Deep Convolutional Neural Networks (DCNNs) are used extensively in medical image segmentation and hence 3D navigation for robot-assisted Minimally Invasive Surgeries (MISs). However, current DCNNs usually use down sampling layers for…

Machine Learning · Computer Science 2020-06-05 Xiao-Yun Zhou , Jian-Qing Zheng , Peichao Li , Guang-Zhong Yang

Vision transformers are effective deep learning models for vision tasks, including medical image segmentation. However, they lack efficiency and translational invariance, unlike convolutional neural networks (CNNs). To model long-range…

Image and Video Processing · Electrical Eng. & Systems 2023-08-15 Liam Chalcroft , Ruben Lourenço Pereira , Mikael Brudfors , Andrew S. Kayser , Mark D'Esposito , Cathy J. Price , Ioannis Pappas , John Ashburner

Most recent transformer-based models show impressive performance on vision tasks, even better than Convolution Neural Networks (CNN). In this work, we present a novel, flexible, and effective transformer-based model for high-quality…

Computer Vision and Pattern Recognition · Computer Science 2021-08-18 Ruohao Guo , Dantong Niu , Liao Qu , Zhenbo Li

Most recent scribble-supervised segmentation methods commonly adopt a CNN framework with an encoder-decoder architecture. Despite its multiple benefits, this framework generally can only capture small-range feature dependency for the…

Computer Vision and Pattern Recognition · Computer Science 2024-02-06 Zihan Li , Yuan Zheng , Dandan Shan , Shuzhou Yang , Qingde Li , Beizhan Wang , Yuanting Zhang , Qingqi Hong , Dinggang Shen

Computer-aided medical image analysis plays a significant role in assisting medical practitioners for expert clinical diagnosis and deciding the optimal treatment plan. At present, convolutional neural networks (CNN) are the preferred…

Image and Video Processing · Electrical Eng. & Systems 2022-04-29 S Niyas , S J Pawan , M Anand Kumar , Jeny Rajan

Convolutional Neural Networks (CNNs), architectures consisting of convolutional layers, have been the standard choice in vision tasks. Recent studies have shown that Vision Transformers (VTs), architectures based on self-attention modules,…

Computer Vision and Pattern Recognition · Computer Science 2022-01-24 Kishaan Jeeveswaran , Senthilkumar Kathiresan , Arnav Varma , Omar Magdy , Bahram Zonooz , Elahe Arani

Convolutional Neural Networks (CNNs) work very well for supervised learning problems when the training dataset is representative of the variations expected to be encountered at test time. In medical image segmentation, this premise is…

Image and Video Processing · Electrical Eng. & Systems 2021-01-26 Neerav Karani , Ertunc Erdil , Krishna Chaitanya , Ender Konukoglu

Skin cancer segmentation poses a significant challenge in medical image analysis. Numerous existing solutions, predominantly CNN-based, face issues related to a lack of global contextual understanding. Alternatively, some approaches resort…

Computer Vision and Pattern Recognition · Computer Science 2024-09-06 Shehan Perera , Yunus Erzurumlu , Deepak Gulati , Alper Yilmaz

We introduce the Convolutional Set Transformer (CST), a novel neural architecture designed to process image sets of arbitrary cardinality that are visually heterogeneous yet share high-level semantics - such as a common category, scene, or…

Computer Vision and Pattern Recognition · Computer Science 2025-09-30 Federico Chinello , Giacomo Boracchi

Deep neural networks have been applied to improve the image quality of fluorescence microscopy imaging. Previous methods are based on convolutional neural networks (CNNs) which generally require more time-consuming training of separate…

Recently, the field of 3D medical segmentation has been dominated by deep learning models employing Convolutional Neural Networks (CNNs) and Transformer-based architectures, each with their distinctive strengths and limitations. CNNs are…

Computer Vision and Pattern Recognition · Computer Science 2024-10-22 Luca Lumetti , Vittorio Pipoli , Kevin Marchesini , Elisa Ficarra , Costantino Grana , Federico Bolelli

One of the most common tasks in medical imaging is semantic segmentation. Achieving this segmentation automatically has been an active area of research, but the task has been proven very challenging due to the large variation of anatomy…

Computer Vision and Pattern Recognition · Computer Science 2018-04-10 Holger R. Roth , Chen Shen , Hirohisa Oda , Masahiro Oda , Yuichiro Hayashi , Kazunari Misawa , Kensaku Mori

There has been exploding interest in embracing Transformer-based architectures for medical image segmentation. However, the lack of large-scale annotated medical datasets make achieving performances equivalent to those in natural images…

Image and Video Processing · Electrical Eng. & Systems 2024-06-04 Saikat Roy , Gregor Koehler , Constantin Ulrich , Michael Baumgartner , Jens Petersen , Fabian Isensee , Paul F. Jaeger , Klaus Maier-Hein

Surface defect detection is an extremely crucial step to ensure the quality of industrial products. Nowadays, convolutional neural networks (CNNs) based on encoder-decoder architecture have achieved tremendous success in various defect…

Computer Vision and Pattern Recognition · Computer Science 2022-07-19 Junpu Wang , Guili Xu , Fuju Yan , Jinjin Wang , Zhengsheng Wang

Transformer-based neural networks have surpassed promising performance on many biomedical image segmentation tasks due to a better global information modeling from the self-attention mechanism. However, most methods are still designed for…

Computer Vision and Pattern Recognition · Computer Science 2023-02-02 Zheyuan Zhang , Ulas Bagci

Dendritic microstructures are ubiquitous in nature and are the primary solidification morphologies in metallic materials. Techniques such as x-ray computed tomography (XCT) have provided new insights into dendritic phase transformation…

Computer Vision and Pattern Recognition · Computer Science 2022-05-04 Jim James , Nathan Pruyne , Tiberiu Stan , Marcus Schwarting , Jiwon Yeom , Seungbum Hong , Peter Voorhees , Ben Blaiszik , Ian Foster