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Over the recent years the importance of numerical experiments has gradually been more recognized. Nonetheless, sufficient documentation of how computational results have been obtained is often not available. Especially in the scientific…

Mathematical Software · Computer Science 2021-05-10 Jörg Fehr , Jan Heiland , Christian Himpe , Jens Saak

Computational methods have reshaped the landscape of modern biology. While the biomedical community is increasingly dependent on computational tools, the mechanisms ensuring open data, open software, and reproducibility are variably…

Other Quantitative Biology · Quantitative Biology 2020-07-28 Jaqueline J. Brito , Jun Li , Jason H. Moore , Casey S. Greene , Nicole A. Nogoy , Lana X. Garmire , Serghei Mangul

Those seeking to reproduce a computational experiment often need to manually look at the code to see how to build necessary libraries, configure parameters, find data, and invoke the experiment; it is not automatic. Automatic…

Software Engineering · Computer Science 2023-07-24 Samuel Grayson , Reed Milewicz , Joshua Teves , Daniel S. Katz , Darko Marinov

The field of deep learning has witnessed significant breakthroughs, spanning various applications, and fundamentally transforming current software capabilities. However, alongside these advancements, there have been increasing concerns…

Machine Learning · Computer Science 2025-05-07 Nikita Ravi , Abhinav Goel , James C. Davis , George K. Thiruvathukal

In this work we introduce repro_eval - a tool for reactive reproducibility studies of system-oriented information retrieval (IR) experiments. The corresponding Python package provides IR researchers with measures for different levels of…

Information Retrieval · Computer Science 2022-01-20 Timo Breuer , Nicola Ferro , Maria Maistro , Philipp Schaer

Computational notebooks are the primary coding tools for data scientists, but their code quality remains understudied and often poor. Given the importance of maintainability and reusability, enhancing code understandability is essential.…

Software Engineering · Computer Science 2025-06-19 Mojtaba Mostafavi Ghahfarokhi , Alireza Asadi , Arash Asgari , Bardia Mohammadi , Abbas Heydarnoori , Masih Beigi Rizi

The purpose of this work is to highlight the content of the Microsoft Recommenders repository and show how it can be used to reduce the time involved in developing recommender systems. The open source repository provides python utilities to…

Information Retrieval · Computer Science 2020-09-01 Scott Graham , Jun-Ki Min , Tao Wu

Mobile application performance is a vital factor for user experience. Yet, performance issues are notoriously difficult to detect in development environments, where they often manifest less conspicuously, making their diagnosis more…

Software Engineering · Computer Science 2026-03-05 Zhengquan Li , Zhenhao Li , Zishuo Ding

Benchmarks are essential in the design of modern HPC installations, as they define key aspects of system components. Beyond synthetic workloads, it is crucial to include real applications that represent user requirements into benchmark…

Computational notebooks (e.g., Jupyter, Google Colab) are widely used by data scientists. A key feature of notebooks is the interactive computing model of iteratively executing cells (i.e., a set of statements) and observing the result…

Databases · Computer Science 2025-04-01 Zhaoheng Li , Supawit Chockchowwat , Ribhav Sahu , Areet Sheth , Yongjoo Park

Context: Experiment replications play a central role in the scientific method. Although software engineering experimentation has matured a great deal, the number of experiment replications is still relatively small. Software engineering…

Software Engineering · Computer Science 2024-02-13 Martín Solari , Sira Vegas , Natalia Juristo

Replicability in machine learning (ML) research is increasingly concerning due to the utilization of complex non-deterministic algorithms and the dependence on numerous hyper-parameter choices, such as model architecture and training…

Machine Learning · Computer Science 2024-06-18 Michael Arbel , Alexandre Zouaoui

Scientific processes rely on software as an important tool for data acquisition, analysis, and discovery. Over the years sustainable software development practices have made progress in being considered as an integral component of research.…

Software Engineering · Computer Science 2023-12-21 Akash Dhruv , Anshu Dubey

Code generation models can benefit data scientists' productivity by automatically generating code from context and text descriptions. An important measure of the modeling progress is whether a model can generate code that can correctly…

Software Engineering · Computer Science 2022-11-18 Junjie Huang , Chenglong Wang , Jipeng Zhang , Cong Yan , Haotian Cui , Jeevana Priya Inala , Colin Clement , Nan Duan , Jianfeng Gao

The machine learning development lifecycle is characterized by iterative and exploratory processes that rely on feedback mechanisms to ensure data and model integrity. Despite the critical role of feedback in machine learning engineering,…

Software Engineering · Computer Science 2024-08-02 Arumoy Shome , Luis Cruz , Diomidis Spinellis , Arie van Deursen

Computational notebooks, such as Jupyter Notebook, have become data scientists' de facto programming environments. Many visualization researchers and practitioners have developed interactive visualization tools that support notebooks, yet…

Human-Computer Interaction · Computer Science 2024-04-01 Zijie J. Wang , David Munechika , Seongmin Lee , Duen Horng Chau

Recent advancements in parallel simulation and successful robotic applications are spurring a resurgence in sampling-based model predictive control. To build on this progress, however, the robotics community needs common tooling for…

Robotics · Computer Science 2025-06-23 Albert H. Li , Brandon Hung , Aaron D. Ames , Jiuguang Wang , Simon Le Cleac'h , Preston Culbertson

Reproducibility in scientific work has been becoming increasingly important in research communities such as machine learning, natural language processing, and computer vision communities due to the rapid development of the research domains…

Computation and Language · Computer Science 2025-01-06 Yoshitomo Matsubara

High-quality exploratory data analysis (EDA) is essential in the data science pipeline, but remains highly dependent on analysts' expertise and effort. While recent LLM-based approaches partially reduce this burden, they struggle to…

Human-Computer Interaction · Computer Science 2026-02-20 Yi Shan , Yixuan He , Zekai Shao , Kai Xu , Siming Chen

Semantic search, a process aimed at delivering highly relevant search results by comprehending the searcher's intent and the contextual meaning of terms within a searchable dataspace, plays a pivotal role in information retrieval. In this…

Information Retrieval · Computer Science 2024-02-21 Lan Li , Jinpeng Lv