English
Related papers

Related papers: Relate and Predict: Structure-Aware Prediction wit…

200 papers

Accurate prediction of protein-ligand binding affinities is an essential challenge in structure-based drug design. Despite recent advances in data-driven methods for affinity prediction, their accuracy is still limited, partially because…

Biomolecules · Quantitative Biology 2024-09-04 Yaosen Min , Ye Wei , Peizhuo Wang , Xiaoting Wang , Han Li , Nian Wu , Stefan Bauer , Shuxin Zheng , Yu Shi , Yingheng Wang , Ji Wu , Dan Zhao , Jianyang Zeng

Structured prediction is a powerful framework for coping with joint prediction of interacting outputs. A central difficulty in using this framework is that often the correct label dependence structure is unknown. At the same time, we would…

Machine Learning · Computer Science 2013-09-27 Ofer Meshi , Elad Eban , Gal Elidan , Amir Globerson

Deep neural networks are susceptible to learn biased models with entangled feature representations, which may lead to subpar performances on various downstream tasks. This is particularly true for under-represented classes, where a lack of…

Computer Vision and Pattern Recognition · Computer Science 2021-11-02 Sanghyeok Chu , Dongwan Kim , Bohyung Han

We present a unified framework called deep dependency networks (DDNs) that combines dependency networks and deep learning architectures for multi-label classification, with a particular emphasis on image and video data. The primary…

Machine Learning · Computer Science 2024-04-19 Shivvrat Arya , Yu Xiang , Vibhav Gogate

Driver attention prediction implies the intention understanding of where the driver intends to go and what object the driver concerned about, which commonly provides a driving task-guided traffic scene understanding. Some recent works…

Computer Vision and Pattern Recognition · Computer Science 2023-08-08 Tianci Zhao , Xue Bai , Jianwu Fang , Jianru Xue

Recent works have shown that exploiting multi-scale representations deeply learned via convolutional neural networks (CNN) is of tremendous importance for accurate contour detection. This paper presents a novel approach for predicting…

Computer Vision and Pattern Recognition · Computer Science 2018-01-03 Dan Xu , Wanli Ouyang , Xavier Alameda-Pineda , Elisa Ricci , Xiaogang Wang , Nicu Sebe

Neural architecture search has been shown to hold great promise towards the automation of deep learning. However in spite of its potential, neural architecture search remains quite costly. To this point, we propose a novel gradient-based…

Machine Learning · Computer Science 2019-02-18 Efi Kokiopoulou , Anja Hauth , Luciano Sbaiz , Andrea Gesmundo , Gabor Bartok , Jesse Berent

Graph Neural Networks (GNNs) have achieved remarkable success in graph-based learning by propagating information among neighbor nodes via predefined aggregation mechanisms. However, such fixed schemes often suffer from two key limitations.…

Computation and Language · Computer Science 2025-10-21 Minghao Guo , Xi Zhu , Haochen Xue , Chong Zhang , Shuhang Lin , Jingyuan Huang , Ziyi Ye , Yongfeng Zhang

We propose Deep Neural Coregionalization, a scalable framework for uncertainty-aware multivariate geostatistics. DNC models multivariate spatial effects through spatially varying latent factors and loadings, assigning deep Gaussian process…

Methodology · Statistics 2026-02-23 Yeseul Jeon , Aaron Scheffler , Rajarshi Guhaniyogi

Humans accumulate knowledge in a lifelong fashion. Modern deep neural networks, on the other hand, are susceptible to catastrophic forgetting: when adapted to perform new tasks, they often fail to preserve their performance on previously…

Computer Vision and Pattern Recognition · Computer Science 2021-04-27 Mengyao Zhai , Lei Chen , Jiawei He , Megha Nawhal , Frederick Tung , Greg Mori

Lots of neural network architectures have been proposed to deal with learning tasks on graph-structured data. However, most of these models concentrate on only node features during the learning process. The edge features, which usually play…

Machine Learning · Computer Science 2021-01-20 Jun Chen , Haopeng Chen

Training complex machine learning models for prediction often requires a large amount of data that is not always readily available. Leveraging these external datasets from related but different sources is therefore an important task if good…

Machine Learning · Computer Science 2018-06-11 Jinsung Yoon , James Jordon , Mihaela van der Schaar

Discovering cause-effect relationships between variables from observational data is a fundamental challenge in many scientific disciplines. However, in many situations it is desirable to directly estimate the change in causal relationships…

Methodology · Statistics 2021-06-15 Asish Ghoshal , Kevin Bello , Jean Honorio

Multi-task learning aims to improve generalization performance of multiple prediction tasks by appropriately sharing relevant information across them. In the context of deep neural networks, this idea is often realized by hand-designed…

Computer Vision and Pattern Recognition · Computer Science 2016-11-17 Yongxi Lu , Abhishek Kumar , Shuangfei Zhai , Yu Cheng , Tara Javidi , Rogerio Feris

In supervised learning, understanding an input's proximity to the training data can help a model decide whether it has sufficient evidence for reaching a reliable prediction. While powerful probabilistic models such as Gaussian Processes…

Machine Learning · Computer Science 2024-06-19 Ifigeneia Apostolopoulou , Benjamin Eysenbach , Frank Nielsen , Artur Dubrawski

Given high-dimensional time series data (e.g., sensor data), how can we detect anomalous events, such as system faults and attacks? More challengingly, how can we do this in a way that captures complex inter-sensor relationships, and…

Machine Learning · Computer Science 2021-06-15 Ailin Deng , Bryan Hooi

This paper introduces the deep coordination graph (DCG) for collaborative multi-agent reinforcement learning. DCG strikes a flexible trade-off between representational capacity and generalization by factoring the joint value function of all…

Machine Learning · Computer Science 2020-06-24 Wendelin Böhmer , Vitaly Kurin , Shimon Whiteson

In clinical treatment, identifying potential adverse reactions of drugs can help assist doctors in making medication decisions. In response to the problems in previous studies that features are high-dimensional and sparse, independent…

Quantitative Methods · Quantitative Biology 2024-07-30 Yufeng Li , Wenchao Zhao , Bo Dang , Xu Yan , Weimin Wang , Min Gao , Mingxuan Xiao

Feature attribution methods, which explain an individual prediction made by a model as a sum of attributions for each input feature, are an essential tool for understanding the behavior of complex deep learning models. However, ensuring…

Machine Learning · Computer Science 2020-10-28 Ethan Weinberger , Joseph Janizek , Su-In Lee

Many machine learning problems require the prediction of multi-dimensional labels. Such structured prediction models can benefit from modeling dependencies between labels. Recently, several deep learning approaches to structured prediction…

Machine Learning · Computer Science 2018-02-14 Nataly Brukhim , Amir Globerson