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Related papers: Dynamic and Thermodynamic Models of Adaptation

200 papers

At very small scales, thermodynamic energy exchanges like work and heat become comparable to thermal energy of the system, which leads to unusual phenomena like the transient violations of Second Law. We explore the generic characters of…

Statistical Mechanics · Physics 2019-06-25 Sourabh Lahiri , Arun M Jayannavar

Quantifying the adaptive landscape in a given dynamical processes has been one of most important goals in theoretical biology. It can have immediate implications for many dynamical properties, such as robustness and plasticity. Based on…

Quantitative Methods · Quantitative Biology 2009-02-09 P Ao

Control was from its very beginning an important concept in cybernetics. Later on, with the works of W. Ross Ashby, for example, biological concepts such as adaptation were interpreted in the light of cybernetic systems theory. Adaptation…

Neural and Evolutionary Computing · Computer Science 2021-09-28 Olivier Del Fabbro , Patrik Christen

The ability to monitor nutrient and other environmental conditions with high sensitivity is crucial for cell growth and survival. Sensory adaptation allows a cell to recover its sensitivity after a transient response to a shift in the…

Subcellular Processes · Quantitative Biology 2016-01-07 Shou-Wen Wang , Yueheng Lan , Lei-Han Tang

World models, which explicitly learn environmental dynamics to lay the foundation for planning, reasoning, and decision-making, are rapidly advancing in predicting both physical dynamics and aspects of social behavior, yet predominantly in…

Computers and Society · Computer Science 2025-10-27 Xiaoyuan Zhang , Chengdong Ma , Yizhe Huang , Weidong Huang , Siyuan Qi , Song-Chun Zhu , Xue Feng , Yaodong Yang

In this paper, we inspect well-known population genetics and social dynamics models. In these models, interacting individuals, while participating in a self-organizing process, give rise to the emergence of complex behaviors and patterns.…

Populations and Evolution · Quantitative Biology 2012-07-11 Sven Banisch , Tanya Araújo

A system responding to a stochastic driving signal can be interpreted as computing, by means of its dynamics, an implicit model of the environmental variables. The system's state retains information about past environmental fluctuations,…

Statistical Mechanics · Physics 2012-10-09 Susanne Still , David A. Sivak , Anthony J. Bell , Gavin E. Crooks

Social dynamics is concerned primarily with interactions among individuals and the resulting group behaviors, modeling the temporal evolution of social systems via the interactions of individuals within these systems. In particular, the…

Machine Learning · Statistics 2016-11-08 Zhen Xu , Wen Dong , Sargur Srihari

From pathogens and computer viruses to genes and memes, contagion models have found widespread utility across the natural and social sciences. Despite their success and breadth of adoption, the approach and structure of these models remain…

Physics and economics are two disciplines that share the common challenge of linking microscopic and macroscopic behaviors. However, while physics is based on collective dynamics, economics is based on individual choices. This conceptual…

Physics and Society · Physics 2011-08-25 Sebastian Grauwin , Dominic Hunt , Eric Bertin , Pablo Jensen

When carrying out tasks in contact with the environment, humans are found to concurrently adapt force, impedance and trajectory. Here we develop a robotic model of this mechanism in humans and analyse the underlying dynamics. We derive a…

Robotics · Computer Science 2016-05-26 Yanan Li , Etienne Burdet

Modern systems are designed to operate in increasingly variable and uncertain environments. Not only are these environments complex, in the sense that they contain a tremendous number of variables, but they also change over time. Systems…

Software Engineering · Computer Science 2022-10-04 Simon Diemert , Jens H. Weber

Thomas Schelling introduced his agent-based model of segregation in 1971 and concluded that even when there is a low amount of intolerance within society that segregation will develop if people follow their individual preferences. A large…

Adaptation and Self-Organizing Systems · Physics 2024-03-05 Joseph D. Johnson , Marisa C. Eisenberg

Ecological systems are emergent features of ecological and adaptive dynamics of a community of interacting species. By natural selection through the abiotic environment and by co-adaptation within the community, species evolve, thereby…

Populations and Evolution · Quantitative Biology 2018-07-03 Katharina Brinck , Henrik Jeldtoft Jensen

Many-body systems relaxing to equilibrium can exhibit complex dynamics even if their steady state is trivial. At low temperatures or high densities their evolution is often dominated by steric hindrances affecting particle motion [1,2,3].…

Statistical Mechanics · Physics 2016-05-10 M. M. Valado , C. Simonelli , M. D. Hoogerland , I. Lesanovsky , J. P. Garrahan , E. Arimondo , D. Ciampini , O. Morsch

Concepts of everyday use like energy, heat, and temperature have acquired a precise meaning after the development of thermodynamics. Thermodynamics provides the basis for understanding how heat and work are related and with the general…

Statistical Mechanics · Physics 2007-05-23 D. Reguera , J. M. Rubi , J. M. G. Vilar

Environmentally-powered computer systems operate on renewable energy harvested from their environment, such as solar or wind, and stored in batteries. While harvesting environmental energy has long been necessary for small-scale embedded…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-05-02 Noman Bashir , Yasra Chandio , David Irwin , Fatima M. Anwar , Jeremy Gummeson , Prashant Shenoy

What features characterise complex system dynamics? Power laws and scale invariance of fluctuations are often taken as the hallmarks of complexity, drawing on analogies with equilibrium critical phenomena[1-3]. Here we argue that slow,…

Statistical Mechanics · Physics 2007-05-23 Paul Anderson , Henrik Jeldtoft Jensen , L. P. Oliveira , Paolo Sibani

In this work we employ various methods of analysis (unfolding simulations and comparative analysis of structures and sequences of proteomes of thermophilic organisms) to show that organisms can follow two major strategies of thermophilic…

Biomolecules · Quantitative Biology 2007-05-23 Igor N. Berezovsky , Eugene I. Shakhnovich

An increasing number of dissident voices claim that the standard neo-Darwinian view of genes as 'leaders' and phenotypes as 'followers' during the process of adaptive evolution should be turned on its head. This idea is older than the…

Populations and Evolution · Quantitative Biology 2015-03-10 Mauro Santos , Eörs Szathmáry , José F. Fontanari