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Petri networks and network models are two frameworks for the compositional design of systems of interacting entities. Here we show how to combine them using the concept of a "catalyst": an entity that is neither destroyed nor created by any…

Category Theory · Mathematics 2024-08-07 John C. Baez , John Foley , Joe Moeller

This paper describes a stand-alone, no-frills tool supporting the analysis of (labelled) place/transition Petri nets and the synthesis of labelled transition systems into Petri nets. It is implemented as a collection of independent,…

Logic in Computer Science · Computer Science 2015-08-21 Eike Best , Uli Schlachter

An abstract network approach is proposed for the description of the dynamics in reactive processes. The phase space of the variables (concentrations in reactive systems) is partitioned into a finite number of segments, which constitute the…

Statistical Mechanics · Physics 2015-06-17 A. Provata , E. Panagakou

Reaction networks, or equivalently Petri nets, are a general framework for describing processes in which entities of various kinds interact and turn into other entities. In chemistry, where the reactions are assigned "rate constants", any…

Mathematical Physics · Physics 2021-11-23 John C. Baez , Blake S. Pollard

Non-interference, in transitive or intransitive form, is defined here over unbounded (Place/Transition) Petri nets. The definitions are adaptations of similar, well-accepted definitions introduced earlier in the framework of labelled…

Cryptography and Security · Computer Science 2011-03-01 Eike Best , Philippe Darondeau , Roberto Gorrieri

We present a unified framework for Petri nets and various variants, such as pre-nets and Kock's whole-grain Petri nets. Our framework is based on a less well-studied notion that we call $\Sigma$-nets, which allow finer control over whether…

Category Theory · Mathematics 2021-04-28 John C. Baez , Fabrizio Genovese , Jade Master , Michael Shulman

We present an approach for flux analysis in process algebra models of biological systems. We perceive flux as the flow of resources in stochastic simulations. We resort to an established correspondence between event structures, a broadly…

Computational Engineering, Finance, and Science · Computer Science 2010-02-23 Ozan Kahramanoğullari

Compositionality and process equivalence are both standard concepts of process algebra. Compositionality means that the behaviour of a compound system relies only on the behaviour of its components, i.e. there is no emergent behaviour.…

Logic in Computer Science · Computer Science 2016-03-04 Paweł Sobociński

Barwise and Seligman stated the first principle of information flow: "Information flow results from regularities in the distributed system." They represent a distributed system in terms of a classification consisting of a set of objects or…

Logic in Computer Science · Computer Science 2022-03-03 Jules Chenou , George Hsieh , Aurelia Williams

In the modelling and analysis of large, real systems, the main problem in their efficient processing is the size of the global model. One of the popular approaches that address this issue is the decomposition of such global model into much…

Multiagent Systems · Computer Science 2023-10-31 Federica Adobbati , Łukasz Mikulski

Time-Basic Petri nets, is a powerful formalism for modeling real-time systems where time constraints are expressed through time functions of marking's time description associated with transition, representing possible firing times. We…

Logic in Computer Science · Computer Science 2021-03-15 Matteo Camilli

Whereas distributed computing research has been very successful in exploring the solvability/impossibility border of distributed computing problems like consensus in representative classes of computing models with respect to model…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-05-27 Hugo Rincon Galeana , Ulrich Schmid

Reversing Petri nets (RPNs) have recently been proposed as a net-basedapproach to model causal and out-of-causal order reversibility. They are based on the notion of individual tokens that can be connected together via bonds. In this paper…

Logic in Computer Science · Computer Science 2022-09-07 Anna Philippou , Kyriaki Psara

Concurrent programming is used in all large and complex computer systems. However, concurrency errors and system failures (ex: crashes and deadlocks) are common. We find that Petri nets can be used to model concurrent systems and find and…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-10-04 Marshall Rawson , Michael Rawson

Reversible computation is an emerging computing paradigm that allows any sequence of operations to be executed in reverse order at any point during computation. Its appeal lies in its potential for lowpower computation and its relevance to…

Logic in Computer Science · Computer Science 2023-11-02 Kamila Barylska , Anna Gogolinska , Lukasz Mikulski , Anna Philippou , Marcin Piatkowski , Kyriaki Psara

Concurrency and probability are both much studied extensions of sequential computation. Within concurrency theory, there is a broad divide between interleaving models and logics, which model concurrency by non-determinism, and `truly…

Formal Languages and Automata Theory · Computer Science 2020-12-21 Nargess Ghahremani , Julian Bradfield

We provide a categorical semantics for bounded Petri nets, both in the collective- and individual-token philosophy. In both cases, we describe the process of bounding a net internally, by just constructing new categories of executions of a…

Category Theory · Mathematics 2022-11-04 Fabrizio Romano Genovese , Fosco Loregian , Daniele Palombi

Reversible computation is an unconventional form of computing that extends the standard forward-only mode of computation with the ability to execute a sequence of operations in reverse at any point during computation. As such, in this…

Logic in Computer Science · Computer Science 2021-01-19 Kyriaki Psara

Our objective is to design a controlled system with a simple method for discrete event systems based on Petri nets. It is possible to construct the Petri net model of a system and the specification separately. By synchronous composition of…

Information Theory · Computer Science 2009-01-28 Abbas Dideban , Hassane. Alla

We present a categorical framework for relating causal models that represent the same system at different levels of abstraction. We define a causal abstraction as natural transformations between appropriate Markov functors, which concisely…

Machine Learning · Statistics 2025-10-07 Markus Englberger , Devendra Singh Dhami