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Scientific Workflow Systems such as Galaxy and Nextflow are essential for scalable, reproducible, and automated bioinformatics analyses. However, developing and understanding scientific workflows remains challenging for many domain…

Software Engineering · Computer Science 2025-08-18 Khairul Alam , Banani Roy

This paper tackles the challenges of implementing few-shot learning on embedded systems, specifically FPGA SoCs, a vital approach for adapting to diverse classification tasks, especially when the costs of data acquisition or labeling prove…

Kubernetes has become the foundation of modern cloud-native infrastructure, yet its management remains complex and fragmented. Administrators must navigate a vast API surface, manage heterogeneous workloads, and coordinate tasks across…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-09-03 Mohsen Seyedkazemi Ardebili , Andrea Bartolini

Machine learning (ML) is now commonplace, powering data-driven applications in various organizations. Unlike the traditional perception of ML in research, ML production pipelines are complex, with many interlocking analytical components…

Databases · Computer Science 2021-03-31 Doris Xin , Hui Miao , Aditya Parameswaran , Neoklis Polyzotis

The proliferation of data across the system lifecycle presents both a significant opportunity and a challenge for Engineering Design and Systems Engineering (EDSE). While this "digital thread" has the potential to drive innovation, the…

Software Engineering · Computer Science 2026-03-19 H. Sinan Bank , Daniel R. Herber

We present DataFlow, a computational framework for building, testing, and deploying high-performance machine learning systems on unbounded time-series data. Traditional data science workflows assume finite datasets and require substantial…

Machine Learning · Computer Science 2026-01-01 Giacinto Paolo Saggese , Paul Smith

The Extract, Transform, Load (ETL) workflow is fundamental for populating and maintaining data warehouses and other data stores accessed by analysts for downstream tasks. A major shortcoming of modern ETL solutions is the extensive need for…

Software Engineering · Computer Science 2025-08-01 Mattia Di Profio , Mingjun Zhong , Yaji Sripada , Marcel Jaspars

DNA is a promising medium for digital information storage for its exceptional density and durability. While prior studies advanced coding theory, workflow design, and simulation tools, challenges such as synthesis costs, sequencing errors,…

Emerging Technologies · Computer Science 2025-10-06 Rakesh Thakur , Lavanya Singh , Yashika , Manomay Bundawala , Aruna Kumar

Serverless functions provide high levels of parallelism, short startup times, and "pay-as-you-go" billing. These attributes make them a natural substrate for data analytics workflows. However, the impossibility of direct communication…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-07-26 Germán T. Eizaguirre , Marc Sánchez-Artigas , Pedro García-López

The integration of machine learning (ML) is critical for industrial competitiveness, yet its adoption is frequently stalled by the prohibitive costs and operational disruptions of upgrading legacy systems. The financial and logistical…

Machine Learning · Computer Science 2026-03-12 Ashiqur Rahman , Hamed Alhoori

As data science continues to grow in popularity, there will be an increasing need to make data science tools more scalable, flexible, and accessible. In particular, automated machine learning (AutoML) systems seek to automate the process of…

Neural and Evolutionary Computing · Computer Science 2016-08-01 Randal S. Olson , Jason H. Moore

The development of increasingly complex IoT systems requires large engineering environments. These environments generally consist of tools from different vendors and are not necessarily integrated well with each other. In order to automate…

Software Engineering · Computer Science 2018-03-12 Andrii Berezovskyi , Jad El-khoury , Omar Kacimi , Frédéric Loiret

Due to ongoing accrual over long durations, a defining characteristic of real-world data streams is the requirement for rolling, often real-time, mechanisms to coarsen or summarize stream history. One common data structure for this purpose…

Data Structures and Algorithms · Computer Science 2025-06-17 Connor Yang , Joey Wagner , Emily Dolson , Luis Zaman , Matthew Andres Moreno

Hospitals around the world collect massive amounts of physiological data from their patients every day. Recently, there has been an increase in research interest to subject this data to statistical analysis to gain more insights and provide…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-03-04 Anand Jayarajan , Kimberly Hau , Andrew Goodwin , Gennady Pekhimenko

Operationalizing AI has become a major endeavor in both research and industry. Automated, operationalized pipelines that manage the AI application lifecycle will form a significant part of tomorrow's infrastructure workloads. To optimize…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-24 Thomas Rausch , Waldemar Hummer , Vinod Muthusamy

Deep learning datasets are expanding at an unprecedented pace, creating new challenges for data processing in model training pipelines. A crucial aspect of these pipelines is dataset shuffling, which significantly improves unbiased learning…

Databases · Computer Science 2023-12-06 Tianle Zhong , Jiechen Zhao , Xindi Guo , Qiang Su , Geoffrey Fox

Biosciences have been revolutionized by next generation sequencing (NGS) technologies in last years, leading to new perspectives in medical, industrial and environmental applications. And although our motivation comes from biosciences, the…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-01-16 Bruno Dantas , Calmenelias Fleitas , Alexandre P. Francisco , José Simão , Cátia Vaz

Continual Learning (CL) allows applications such as user personalization and household robots to learn on the fly and adapt to context. This is an important feature when context, actions, and users change. However, enabling CL on…

Machine Learning · Computer Science 2023-11-21 Young D. Kwon , Jagmohan Chauhan , Hong Jia , Stylianos I. Venieris , Cecilia Mascolo

As Kubernetes becomes the infrastructure of the cloud-native era, the integration of workflow systems with Kubernetes is gaining more and more popularity. To our knowledge, workflow systems employ scheduling algorithms that optimize task…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-07-07 Chenggang Shan , Guan Wang , Yuanqing Xia , Yufeng Zhan , Jinhui Zhang

This paper presents a unified framework for codifying and automating optimization strategies to efficiently deploy deep neural networks (DNNs) on resource-constrained hardware, such as FPGAs, while maintaining high performance, accuracy,…

Hardware Architecture · Computer Science 2026-02-11 Zhiqiang Que , Jose G. F. Coutinho , Ce Guo , Hongxiang Fan , Wayne Luk