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For a global breeding organization, identifying the next generation of superior crops is vital for its success. Recognizing new genetic varieties requires years of in-field testing to gather data about the crop's yield, pest resistance,…

Computer Vision and Pattern Recognition · Computer Science 2021-08-03 Saba Moeinizade , Hieu Pham , Ye Han , Austin Dobbels , Guiping Hu

Image segmentation is a fundamental task in image analysis and clinical practice. The current state-of-the-art techniques are based on U-shape type encoder-decoder networks with skip connections, called U-Net. Despite the powerful…

Computer Vision and Pattern Recognition · Computer Science 2023-02-02 Chun-Wun Cheng , Christina Runkel , Lihao Liu , Raymond H Chan , Carola-Bibiane Schönlieb , Angelica I Aviles-Rivero

Cervical cancer is the fourth most common category of cancer, affecting more than 500,000 women annually, owing to the slow detection procedure. Early diagnosis can help in treating and even curing cancer, but the tedious, time-consuming…

Computer Vision and Pattern Recognition · Computer Science 2021-08-24 Rohit Kundu , Hritam Basak , Akhil Koilada , Soham Chattopadhyay , Sukanta Chakraborty , Nibaran Das

Monitoring the responses of plants to environmental changes is essential for plant biodiversity research. This, however, is currently still being done manually by botanists in the field. This work is very laborious, and the data obtained…

Computer Vision and Pattern Recognition · Computer Science 2021-07-29 Matthias Körschens , Paul Bodesheim , Christine Römermann , Solveig Franziska Bucher , Mirco Migliavacca , Josephine Ulrich , Joachim Denzler

Image segmentation and classification are the two main fundamental steps in pattern recognition. To perform medical image segmentation or classification with deep learning models, it requires training on large image dataset with annotation.…

Computer Vision and Pattern Recognition · Computer Science 2020-01-17 Anandhanarayanan Kamalakannan , Shiva Shankar Ganesan , Govindaraj Rajamanickam

Determining cell identities in imaging sequences is an important yet challenging task. The conventional method for cell identification is via cell tracking, which is complex and can be time-consuming. In this study, we propose an innovative…

Quantitative Methods · Quantitative Biology 2024-03-05 Baiyang Dai , Jiamin Yang , Hari Shroff , Patrick La Riviere

Zebrafish embryos are a valuable model for drug discovery due to their optical transparency and genetic similarity to humans. However, current evaluations rely on manual inspection, which is costly and labor-intensive. While machine…

Computer Vision and Pattern Recognition · Computer Science 2026-05-12 Sarath Sivaprasad , Hui-Po Wang , Anna-Lisa Jäckel , Jonas Baumann , Carole Baumann , Jennifer Herrmann , Mario Fritz

The poor contrast and the overlapping of cervical cell cytoplasm are the major issues in the accurate segmentation of cervical cell cytoplasm. This paper presents an automated unsupervised cytoplasm segmentation approach which can…

Computer Vision and Pattern Recognition · Computer Science 2018-07-16 Pranav Kumar , S L Happy , Swarnadip Chatterjee , Debdoot Sheet , Aurobinda Routray

Automatic detection of brain neoplasm in Magnetic Resonance Imaging (MRI) is gaining importance in many medical diagnostic applications. This report presents two improvements for brain neoplasm detection in MRI data: an advanced…

Computer Vision and Pattern Recognition · Computer Science 2021-01-26 Nilanjan Sinhababu , Monalisa Sarma , Debasis Samanta

Accurately identifying oocytes that progress to the blastocyst stage is crucial in reproductive medicine, but the limited availability of annotated high-quality embryo images presents challenges for developing automated diagnostic tools. To…

Quantitative Methods · Quantitative Biology 2025-06-18 Alejandro Golfe , Natalia P. García-de-la-puente , Adrián Colomer , Valery Naranjo

The image classification problem has been deeply investigated by the research community, with computer vision algorithms and with the help of Neural Networks. The aim of this paper is to build an image classifier for satellite images of…

Computer Vision and Pattern Recognition · Computer Science 2021-10-01 Jonas Bokstaller , Yihang She , Zhehan Fu , Tommaso Macrì

In the effort to aid cytologic diagnostics by establishing automatic single cell screening using high throughput digital holographic microscopy for clinical studies thousands of images and millions of cells are captured. The bottleneck lies…

Image and Video Processing · Electrical Eng. & Systems 2024-10-28 Julia Sistermanns , Ellen Emken , Gregor Weirich , Oliver Hayden , Wolfgang Utschick

Pathological diagnosis is the gold standard for cancer diagnosis, but it is labor-intensive, in which tasks such as cell detection, classification, and counting are particularly prominent. A common solution for automating these tasks is…

Image and Video Processing · Electrical Eng. & Systems 2021-10-27 Anyu Mao , Jialun Wu , Xinrui Bao , Zeyu Gao , Tieliang Gong , Chen Li

Detecting and segmenting individual cells from microscopy images is critical to various life science applications. Traditional cell segmentation tools are often ill-suited for applications in brightfield microscopy due to poor contrast and…

Image and Video Processing · Electrical Eng. & Systems 2020-05-20 Rituparna Sarkar , Suvadip Mukherjee , Elisabeth Labruyère , Jean-Christophe Olivo-Marin

We propose a method for annotating the location of objects in ImageNet. Traditionally, this is cast as an image window classification problem, where each window is considered independently and scored based on its appearance alone. Instead,…

Computer Vision and Pattern Recognition · Computer Science 2015-08-05 Alexander Vezhnevets , Vittorio Ferrari

With fine-grained classification, we identify unique characteristics to distinguish among classes of the same super-class. We are focusing on species recognition in Insecta, as they are critical for biodiversity monitoring and at the base…

Computer Vision and Pattern Recognition · Computer Science 2024-04-05 Rita Pucci , Vincent J. Kalkman , Dan Stowell

Medical image segmentation is particularly critical as a prerequisite for relevant quantitative analysis in the treatment of clinical diseases. For example, in clinical cervical cancer radiotherapy, after acquiring subabdominal MRI images,…

Image and Video Processing · Electrical Eng. & Systems 2023-06-30 Yu Xiao , Xin Yang , Sijuan Huang , Lihua Guo

Nuclei detection and segmentation in hematoxylin and eosin-stained (H&E) tissue images are important clinical tasks and crucial for a wide range of applications. However, it is a challenging task due to nuclei variances in staining and…

Image and Video Processing · Electrical Eng. & Systems 2023-10-09 Fabian Hörst , Moritz Rempe , Lukas Heine , Constantin Seibold , Julius Keyl , Giulia Baldini , Selma Ugurel , Jens Siveke , Barbara Grünwald , Jan Egger , Jens Kleesiek

It is common in anthropology and paleontology to address questions about extant and extinct species through the quantification of osteological features observable in micro-computed tomographic (micro-CT) scans. In cases where remains were…

Image and Video Processing · Electrical Eng. & Systems 2021-04-23 Amirsaeed Yazdani , Yung-Chen Sun , Nicholas B. Stephens , Timothy Ryan , Vishal Monga

We develop a novel optical neural network (ONN) framework which introduces a degree of scalar invariance to image classification estima- tion. Taking a hint from the human eye, which has higher resolution near the center of the retina,…

Computer Vision and Pattern Recognition · Computer Science 2018-05-30 Grant Fennessy , Yevgeniy Vorobeychik
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