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The ability to extrapolate gene expression dynamics in living single cells requires robust cell segmentation, and one of the challenges is the amorphous or irregularly shaped cell boundaries. To address this issue, we modified the U-Net…

Quantitative Methods · Quantitative Biology 2020-01-17 Nanyan Zhu , Chen Liu , Zakary S. Singer , Tal Danino , Andrew F. Laine , Jia Guo

Retinal vessel segmentation is crucial for intelligent ophthalmic diagnosis, yet it faces three major challenges: insufficient multi-scale feature fusion, disruption of contextual continuity, and noise interference. This study proposes a…

Computer Vision and Pattern Recognition · Computer Science 2025-09-30 Xinran Xu , Yuliang Ma , Sifu Cai , Ming Meng , Qiang Lv , Ruoyan Shi

Cancer is an abnormal growth with potential to invade locally and metastasize to distant organs. Accurate auto-segmentation of the tumor and surrounding normal tissues is required for radiotherapy treatment plan optimization. Recent…

Image and Video Processing · Electrical Eng. & Systems 2025-07-31 Syed Haider Ali , Asrar Ahmad , Muhammad Ali , Asifullah Khan , Nadeem Shaukat

Non-invasive radiological-based lesion characterization and identification, e.g., to differentiate cancer subtypes, has long been a major aim to enhance oncological diagnosis and treatment procedures. Here we study a specific population of…

Computer Vision and Pattern Recognition · Computer Science 2020-09-01 Yuankai Huo , Jinzheng Cai , Chi-Tung Cheng , Ashwin Raju , Ke Yan , Bennett A. Landman , Jing Xiao , Le Lu , Chien-Hung Liao , Adam P. Harrison

Automated volumetric segmentation of the pancreas on cross-sectional imaging is needed for diagnosis and follow-up of pancreatic diseases. While CT-based pancreatic segmentation is more established, MRI-based segmentation methods are…

It is a challenge to segment the location and size of rectal cancer tumours through deep learning. In this paper, in order to improve the ability of extracting suffi-cient feature information in rectal tumour segmentation, attention…

Image and Video Processing · Electrical Eng. & Systems 2022-10-28 Hongwei Wu , Junlin Wang , Xin Wang , Hui Nan , Yaxin Wang , Haonan Jing , Kaixuan Shi

Positron emission tomography (PET) combined with computed tomography (CT) imaging is routinely used in cancer diagnosis and prognosis by providing complementary information. Automatically segmenting tumors in PET/CT images can significantly…

Image and Video Processing · Electrical Eng. & Systems 2024-03-29 Jinpeng Lu , Jingyun Chen , Linghan Cai , Songhan Jiang , Yongbing Zhang

Accurate segmentation of multiple organs and the differentiation of pathological tissues in medical imaging are crucial but challenging, especially for nuanced classifications and ambiguous organ boundaries. To tackle these challenges, we…

Image and Video Processing · Electrical Eng. & Systems 2024-09-23 Chengkun Sun , Russell Stevens Terry , Jiang Bian , Jie Xu

Incorporating human domain knowledge for breast tumor diagnosis is challenging, since shape, boundary, curvature, intensity, or other common medical priors vary significantly across patients and cannot be employed. This work proposes a new…

Image and Video Processing · Electrical Eng. & Systems 2020-09-03 Aleksandar Vakanski , Min Xian , Phoebe Freer

Peripancreatic vessel segmentation and anatomical labeling play extremely important roles to assist the early diagnosis, surgery planning and prognosis for patients with pancreatic tumors. However, most current techniques cannot achieve…

Image and Video Processing · Electrical Eng. & Systems 2023-03-07 Liwen Zou , Zhenghua Cai , Liang Mao , Ziwei Nie , Yudong Qiu , Xiaoping Yang

Objective: Magnetic resonance imaging (MRI) has been widely used for the analysis and diagnosis of brain diseases. Accurate and automatic brain tumor segmentation is of paramount importance for radiation treatment. However, low tissue…

Image and Video Processing · Electrical Eng. & Systems 2022-04-18 Jiangyun Li , Hong Yu , Chen Chen , Meng Ding , Sen Zha

Automated segmentation of structural defects from visual inspection imagery remains challenging due to the diversity of damage types, extreme class imbalance, and the need for precise boundary delineation. This paper presents DeltaSeg, a…

Computer Vision and Pattern Recognition · Computer Science 2026-04-22 Enrique Hernandez Noguera , Md Meftahul Ferdaus , Elias Ioup , Mahdi Abdelguerfi

Pancreatic duct dilation indicates a high risk of various pancreatic diseases. Segmentation of dilated pancreatic ducts on computed tomography (CT) images shows the potential to assist the early diagnosis, surgical planning and prognosis.…

Computer Vision and Pattern Recognition · Computer Science 2023-03-07 Liwen Zou , Zhenghua Cai , Yudong Qiu , Luying Gui , Liang Mao , Xiaoping Yang

Inspired by the success of Transformers in Computer vision, Transformers have been widely investigated for medical imaging segmentation. However, most of Transformer architecture are using the recent transformer architectures as encoder or…

Image and Video Processing · Electrical Eng. & Systems 2024-04-30 Fares Bougourzi , Fadi Dornaika , Abdelmalik Taleb-Ahmed , Vinh Truong Hoang

Background: Accurate segmentation of diffuse large B-cell lymphoma (DLBCL) lesions is challenging due to their complex patterns in medical imaging. Objective: This study aims to develop a precise segmentation method for DLBCL using…

Image and Video Processing · Electrical Eng. & Systems 2024-09-10 Huan Huang , Liheng Qiu , Shenmiao Yang , Longxi Li , Jiaofen Nan , Yanting Li , Chuang Han , Fubao Zhu , Chen Zhao , Weihua Zhou

Recently, it has been demonstrated that the performance of a deep convolutional neural network can be effectively improved by embedding an attention module into it. In this work, a novel lightweight and effective attention method named…

Computer Vision and Pattern Recognition · Computer Science 2021-07-23 Hu Zhang , Keke Zu , Jian Lu , Yuru Zou , Deyu Meng

Early detection of cancer can help improve patient prognosis by early intervention. Head and neck cancer is diagnosed in specialist centres after a surgical biopsy, however, there is a potential for these to be missed leading to delayed…

Computer Vision and Pattern Recognition · Computer Science 2024-05-08 Abdullah Alsalemi , Anza Shakeel , Mollie Clark , Syed Ali Khurram , Shan E Ahmed Raza

Colorectal cancer ranks among the most common and deadly cancers, emphasizing the need for effective early detection and treatment. To address the limitations of traditional colonoscopy, including high miss rates due to polyp variability,…

Computer Vision and Pattern Recognition · Computer Science 2025-10-14 Arshia Yousefi Nezhad , Helia Aghaei , Hedieh Sajedi

In this paper, we propose a bottleneck supervised (BS) U-Net model for liver and tumor segmentation. Our main contributions are: first, we propose a variation of the original U-Net that incorporates dense modules, inception modules and…

Computer Vision and Pattern Recognition · Computer Science 2019-03-14 Song Li , Geoffrey Kwok Fai Tso

Pancreas segmentation in medical image processing is a persistent challenge due to its small size, low contrast against adjacent tissues, and significant topological variations. Traditional level set methods drive boundary evolution using…

Computer Vision and Pattern Recognition · Computer Science 2025-11-04 Yue Gou , Fanghui Song , Yuming Xing , Shengzhu Shi , Zhichang Guo , Boying Wu