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Euclidean distance matrices (EDM) are matrices of squared distances between points. The definition is deceivingly simple: thanks to their many useful properties they have found applications in psychometrics, crystallography, machine…

Other Computer Science · Computer Science 2016-11-15 Ivan Dokmanic , Reza Parhizkar , Juri Ranieri , Martin Vetterli

Deep learning (DL) based semantic segmentation methods have achieved excellent performance in biomedical image segmentation, producing high quality probability maps to allow extraction of rich instance information to facilitate good…

Computer Vision and Pattern Recognition · Computer Science 2022-06-06 Peixian Liang , Yizhe Zhang , Yifan Ding , Jianxu Chen , Chinedu S. Madukoma , Tim Weninger , Joshua D. Shrout , Danny Z. Chen

Finding meaningful representations and distances of hierarchical data is important in many fields. This paper presents a new method for hierarchical data embedding and distance. Our method relies on combining diffusion geometry, a central…

Machine Learning · Computer Science 2023-05-31 Ya-Wei Eileen Lin , Ronald R. Coifman , Gal Mishne , Ronen Talmon

Diffusion maps are an emerging data-driven technique for non-linear dimensionality reduction, which are especially useful for the analysis of coherent structures and nonlinear embeddings of dynamical systems. However, the computational…

Machine Learning · Statistics 2018-02-27 N. Benjamin Erichson , Lionel Mathelin , Steven L. Brunton , J. Nathan Kutz

Diffusion maps are a commonly used kernel-based method for manifold learning, which can reveal intrinsic structures in data and embed them in low dimensions. However, as with most kernel methods, its implementation requires a heavy…

Machine Learning · Computer Science 2019-12-03 Scott Gigante , Jay S. Stanley , Ngan Vu , David van Dijk , Kevin Moon , Guy Wolf , Smita Krishnaswamy

Positive definite kernels are an important tool in machine learning that enable efficient solutions to otherwise difficult or intractable problems by implicitly linearizing the problem geometry. In this paper we develop a set-theoretic…

Machine Learning · Computer Science 2018-08-22 Andrew Gardner , Christian A. Duncan , Jinko Kanno , Rastko R. Selmic

While diffusion models can learn complex distributions, sampling requires a computationally expensive iterative process. Existing distillation methods enable efficient sampling, but have notable limitations, such as performance degradation…

Machine Learning · Computer Science 2024-12-09 Sirui Xie , Zhisheng Xiao , Diederik P Kingma , Tingbo Hou , Ying Nian Wu , Kevin Patrick Murphy , Tim Salimans , Ben Poole , Ruiqi Gao

The earth mover's distance (EMD) is a well-known metric on spaces of histograms; roughly speaking, the EMD measures the minimum amount of work required to equalize two histograms. The EMD has a natural generalization that compares an…

Combinatorics · Mathematics 2023-06-22 William Q. Erickson

The Earth Mover Distance (EMD) between two sets of points $A, B \subseteq \mathbb{R}^d$ with $|A| = |B|$ is the minimum total Euclidean distance of any perfect matching between $A$ and $B$. One of its generalizations is asymmetric EMD,…

Computational Complexity · Computer Science 2019-09-25 Dhruv Rohatgi

We give a reduction from $(1+\varepsilon)$-approximate Earth Mover's Distance (EMD) to $(1+\varepsilon)$-approximate Closest Pair (CP). As a consequence, we improve the fastest known approximation algorithm for high-dimensional EMD. Here,…

Data Structures and Algorithms · Computer Science 2025-08-27 Lorenzo Beretta , Vincent Cohen-Addad , Rajesh Jayaram , Erik Waingarten

Dataset expansion can effectively alleviate the problem of data scarcity for medical image segmentation, due to privacy concerns and labeling difficulties. However, existing expansion algorithms still face great challenges due to their…

Image and Video Processing · Electrical Eng. & Systems 2023-06-07 Shitong Shao , Xiaohan Yuan , Zhen Huang , Ziming Qiu , Shuai Wang , Kevin Zhou

Given only a collection of points sampled from a Riemannian manifold embedded in a Euclidean space, in this paper we propose a new method to solve elliptic partial differential equations (PDEs) supplemented with boundary conditions. Notice…

Numerical Analysis · Mathematics 2022-11-29 Ryan Vaughn , Tyrus Berry , Harbir Antil

Transformer-based Diffusion Probabilistic Models (DPMs) have shown more potential than CNN-based DPMs, yet their extensive computational requirements hinder widespread practical applications. To reduce the computation budget of…

Computer Vision and Pattern Recognition · Computer Science 2024-11-01 Xinwang Chen , Ning Liu , Yichen Zhu , Feifei Feng , Jian Tang

The earth mover's distance (EMD), also called the first Wasserstein distance, can be naturally extended to compare arbitrarily many probability distributions, rather than only two, on the set $[n]=\{1,\dots,n\}$. We present the details for…

Combinatorics · Mathematics 2021-12-15 William Q. Erickson

Earth system models (ESMs) are the principal tools used in climate science to generate future climate projections under various atmospheric emissions scenarios on a global or regional scale. Generative deep learning approaches are suitable…

Atmospheric and Oceanic Physics · Physics 2024-04-16 Katie Christensen , Lyric Otto , Seth Bassetti , Claudia Tebaldi , Brian Hutchinson

Diffusion models (DMs) have been adopted across diverse fields with its remarkable abilities in capturing intricate data distributions. In this paper, we propose a Fast Diffusion Model (FDM) to significantly speed up DMs from a stochastic…

Computer Vision and Pattern Recognition · Computer Science 2023-10-05 Zike Wu , Pan Zhou , Kenji Kawaguchi , Hanwang Zhang

Textual network embedding leverages rich text information associated with the network to learn low-dimensional vectorial representations of vertices. Rather than using typical natural language processing (NLP) approaches, recent research…

Computation and Language · Computer Science 2019-01-15 Xinyuan Zhang , Yitong Li , Dinghan Shen , Lawrence Carin

Given a metric space $(X,d_X)$, the earth mover distance between two distributions over $X$ is defined as the minimum cost of a bipartite matching between the two distributions. The doubling dimension of a metric $(X, d_X)$ is the smallest…

Data Structures and Algorithms · Computer Science 2010-02-23 Shi Li

Color descriptors are one of the important features used in content-based image retrieval. The Dominant Color Descriptor (DCD) represents a few perceptually dominant colors in an image through color quantization. For image retrieval based…

Information Retrieval · Computer Science 2011-08-11 Min-Hee Jang , Sang-Wook Kim , Christos Faloutsos , Sunju Park

We address the problem of defining a network graph on a large collection of classes. Each class is comprised of a collection of data points, sampled in a non i.i.d. way, from some unknown underlying distribution. The application we consider…

Machine Learning · Statistics 2017-07-04 Alexander Cloninger , Brita Roy , Carley Riley , Harlan M. Krumholz