Related papers: A Linear Time Algorithm for Constructing Hierarchi…
The overlap graphs of subtrees in a tree (SOGs) generalise many other graphs classes with set representation characterisations. The complexity of recognising SOGs in open. The complexities of recognising many subclasses of SOGs are known.…
Assembling genomic sequences from a set of overlapping reads is one of the most fundamental problems in computational biology. Algorithms addressing the assembly problem fall into two broad categories -- based on the data structures which…
Given two graphs $H$ and $G$, the Subgraph Isomorphism problem asks if $H$ is isomorphic to a subgraph of $G$. While NP-hard in general, algorithms exist for various parameterized versions of the problem: for example, the problem can be…
Given an input $x$, and a search problem $F$, local computation algorithms (LCAs) implement access to specified locations of $y$ in a legal output $y \in F(x)$, using polylogarithmic time and space. Mansour et al., (2012), had previously…
We described a simple algorithm running in linear time for each fixed constant $k$, that either establishes that the pathwidth of a graph $G$ is greater than $k$, or finds a path-decomposition of $G$ of width at most $O(2^{k})$. This…
For a graph $H$ and an $n$-vertex graph $G$, the $H$-bootstrap process on $G$ is the process which starts with $G$ and, at every time step, adds any missing edges on the vertices of $G$ that complete a copy of $H$. This process eventually…
We define a $q$-linear path in a hypergraph $H$ as a sequence $(e_1,\ldots,e_L)$ of edges of $H$ such that $|e_i \cap e_{i+1}| \in [\![1,q]\!]$ and $e_i \cap e_j=\varnothing$ if $|i-j|>1$. In this paper, we study the connected components…
Hypergraphs are generalisation of graphs in which a hyperedge can connect any number of vertices. It can describe n-ary relationships and high-order information among entities compared to conventional graphs. In this paper, we study the…
We give an algorithm to morph planar graph drawings that achieves small grid size at the expense of allowing a constant number of bends on each edge. The input is an $n$-vertex planar graph and two planar straight-line drawings of the graph…
We give two new approximation algorithms to compute the fractional hypertree width of an input hypergraph. The first algorithm takes as input $n$-vertex $m$-edge hypergraph $H$ of fractional hypertree width at most $\omega$, runs in…
Subgraph Isomorphism is a very basic graph problem, where given two graphs $G$ and $H$ one is to check whether $G$ is a subgraph of $H$. Despite its simple definition, the Subgraph Isomorphism problem turns out to be very broad, as it…
Position heaps are index structures of text strings used for the string matching problem. They are rooted trees whose edges and nodes are labeled and numbered, respectively. This paper is concerned with variants of the inverse problem of…
Linearizability is the strongest correctness property for both shared memory and message passing systems. One of its useful features is the compositionality: a history (execution) is linearizable if and only if each object (component)…
Although the inference of global community structure in networks has recently become a topic of great interest in the physics community, all such algorithms require that the graph be completely known. Here, we define both a measure of local…
We present a novel attribute learning framework named Hypergraph-based Attribute Predictor (HAP). In HAP, a hypergraph is leveraged to depict the attribute relations in the data. Then the attribute prediction problem is casted as a…
We present a new method for solving the hidden polynomial graph problem (HPGP) which is a special case of the hidden polynomial problem (HPP). The new approach yields an efficient quantum algorithm for the bivariate HPGP even when the input…
In this paper we present a framework of key algorithms and data-structures for efficiently generating timetables for any number of AGVs from any given positioning on any given graph to accomplish any given demands as long as a few easily…
We present the first $\mathrm{o}(n)$-space polynomial-time algorithm for computing the length of a longest common subsequence. Given two strings of length $n$, the algorithm runs in $\mathrm{O}(n^{3})$ time with $\mathrm{O}\left(\frac{n…
In earlier versions of the community discovering problem, the overlap between communities was restricted by a simple count upper-bound [17,5,11,8]. In this paper, we introduce the $\Pi$-Packing with $\alpha()$-Overlap problem to allow for…
We give the first Congested Clique algorithm that computes a sparse hopset with polylogarithmic hopbound in polylogarithmic time. Given a graph $G=(V,E)$, a $(\beta,\epsilon)$-hopset $H$ with "hopbound" $\beta$, is a set of edges added to…