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Communities on GitHub often use issue labels as a way of triaging issues by assigning them priority ratings based on how urgently they should be addressed. The labels used are determined by the repository contributors and not standardised…

Software Engineering · Computer Science 2024-05-20 James Caddy , Christoph Treude

While open source communities attract diverse contributors across the globe, only a few open source software repositories provide essential documentation, such as ReadMe or CONTRIBUTING files, in languages other than English. Recently,…

Software Engineering · Computer Science 2026-01-05 Elijah Kayode Adejumo , Mariam Guizani , Fatemeh Vares , Brittany Johnson

This document explores the advantages of integrating open source software and practices in managing a scientific lab, emphasizing reproducibility and the avoidance of pitfalls. It details practical applications from website management using…

Computers and Society · Computer Science 2024-05-14 Julien Cohen-Adad

Laboratory research is a complex, collaborative process that involves several stages, including hypothesis formulation, experimental design, data generation and analysis, and manuscript writing. Although reproducibility and data sharing are…

Other Quantitative Biology · Quantitative Biology 2025-02-12 Katharine Y. Chen , Maria Toro-Moreno , Arvind Rasi Subramaniam

Code churn refers to the measure of the amount of code added, modified, or deleted in a project and is often used to assess codebase stability and maintainability. Program comprehension or how understandable the changes are, is equally…

Software Engineering · Computer Science 2024-10-10 Ani Hovhannisyan , Youmei Fan , Gema Rodriguez-Perez , Raula Gaikovina Kula

Perhaps the most widely used form of code documentation is function header comments. We performed a large-scale survey of 367 developers to catalog their expectations from such documentation and to chronicle actual practice. Paradoxically,…

Software Engineering · Computer Science 2024-01-17 Arthur Oxenhorn , Almog Mor , Uri Stern , Dror G. Feitelson

To better understand the shortcomings of class-level documentation, we conducted a survey of 167 experienced software developers. The survey focused on the participants' programming-related information needs and how often class-level…

Software Engineering · Computer Science 2022-05-09 Jianwei Wu , Jining Yu , David Shepherd , James Clause

Background. The Software Bill of Materials (SBOM) is a machine-readable list of all the software dependencies included in a software. SBOM emerged as way to assist securing the software supply chain. However, despite mandates from…

Software Engineering · Computer Science 2025-09-03 Oleksii Novikov , Davide Fucci , Oleksandr Adamov , Daniel Mendez

A common assumption suggests that individuals tend to work with others who are similar to them. However, studies on team working and ability of the group to solve complex problems highlight that diversity plays a critical role during…

Social and Information Networks · Computer Science 2021-10-14 Dorota Celińska-Kopczyńska

Software development projects involve the use of a wide range of tools to produce a software artifact. Software repositories such as source control systems have become a focus for emergent research because they are a source of rich…

Software Engineering · Computer Science 2016-04-20 Jacqui Finlay , Russel Pears , Andy M. Connor

GitHub has become a popular social application platform, where a large number of users post their open source projects. In particular, an increasing number of researchers release repositories of source code related to their research papers…

Social and Information Networks · Computer Science 2020-04-14 Huajie Shao , Dachun Sun , Jiahao Wu , Zecheng Zhang , Aston Zhang , Shuochao Yao , Shengzhong Liu , Tianshi Wang , Chao Zhang , Tarek Abdelzaher

Background: Data mining and analyzing of public Git software repositories is a growing research field. The tools used for studies that investigate a single project or a group of projects have been refined, but it is not clear whether the…

Software Engineering · Computer Science 2020-08-18 Adam Tutko , Austin Henley , Audris Mockus

Software engineering has long studied how software developers work, building a body of work which forms the foundation of many software engineering best practices, tools, and theories. Recently, some developers have begun recording videos…

Software Engineering · Computer Science 2019-05-28 Abdulaziz Alaboudi , Thomas D. LaToza

Machine Learning software documentation is different from most of the documentations that were studied in software engineering research. Often, the users of these documentations are not software experts. The increasing interest in using…

Software Engineering · Computer Science 2020-02-03 Yalda Hashemi , Maleknaz Nayebi , Giuliano Antoniol

Research software is crucial in the research process and the growth of Open Science underscores the importance of accessing research artifacts, like data and code, raising traceability challenges among outputs. While it is a clear principle…

Software Engineering · Computer Science 2025-07-31 Domhnall Carlin , Austen Rainer

Popular and large contemporary open-source projects now embrace a diverse set of documentation for communication channels. Examples include contribution guidelines (i.e., commit message guidelines, coding rules, submission guidelines), code…

Software Engineering · Computer Science 2023-07-17 Dong Wang , Masanari Kondo , Yasutaka Kamei , Raula Gaikovina Kula , Naoyasu Ubayashi

One in five arXiv articles published in 2021 contained a URI to a Git Hosting Platform (GHP), which demonstrates the growing prevalence of GHP URIs in scholarly publications. However, GHP URIs are vulnerable to the same reference rot that…

Digital Libraries · Computer Science 2024-01-11 Emily Escamilla , Martin Klein , Talya Cooper , Vicky Rampin , Michele C. Weigle , Michael L. Nelson

Background: Open source software has an increasing importance in modern software development. However, there is also a growing concern on the sustainability of such projects, which are usually managed by a small number of developers,…

Software Engineering · Computer Science 2019-01-31 Jailton Coelho , Marco Tulio Valente , Luciana L. Silva , Emad Shihab

The npm (Node Package Manager) ecosystem is the most important package manager for JavaScript development with millions of users. Consequently, a plethora of earlier work investigated how vulnerability reporting, patch propagation, and in…

Cryptography and Security · Computer Science 2025-06-10 Rajdeep Ghosh , Shiladitya De , Mainack Mondal

Large Language Models (LLMs) often struggle with code generation tasks involving niche software libraries. Existing code generation techniques with only human-oriented documentation can fail -- even when the LLM has access to web search and…

Software Engineering · Computer Science 2025-05-09 Sandya Wijaya , Jacob Bolano , Alejandro Gomez Soteres , Shriyanshu Kode , Yue Huang , Anant Sahai