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Biomembranes are thin capacitors with the unique feature of displaying phase transitions in a physiologically relevant regime. We investigate the voltage and lateral pressure dependence of their capacitance close to their chain melting…

Biological Physics · Physics 2012-09-18 Thomas Heimburg

In this research, the aim is to develop a repetitive firing stopper mechanism using electrical fields exerted on the fiber. The Hodgkin - Huxley nerve fiber model is used for modeling the membrane potential behavior. The repetitive firing…

Neurons and Cognition · Quantitative Biology 2015-03-19 Resat Ozgur Doruk

Non-equilibrium electrochemistry raises new challenges for atomistic simulation: we need to perform molecular dynamics for the nuclear degrees of freedom with an explicit description of the electrons, which in turn must be free to enter and…

Mesoscale and Nanoscale Physics · Physics 2018-01-17 Mario G. Zauchner , Andrew P. Horsfield , Tchavdar N. Todorov

In molecular simulations, neural network force fields aim at achieving \emph{ab initio} accuracy with reduced computational cost. This work introduces enhancements to the Deep Potential network architecture, integrating a message-passing…

Computational Physics · Physics 2024-04-09 Ruiqi Gao , Yifan Li , Roberto Car

We formulate and analyze interior penalty discontinuous Galerkin methods for coupled elliptic PDEs modeling excitable tissue, represented by intracellular and extracellular domains sharing a common interface. The PDEs are coupled through a…

Numerical Analysis · Mathematics 2024-11-06 Rami Masri , Keegan L. A. Kirk , Eirill Hauge , Miroslav Kuchta

The initial version of the planned paper has gone through a major revision in 2025. First, the paper ended up growing a bit too long, and as a result of that, we decided to split it into two parts. The first part focuses on the model for…

Biological Physics · Physics 2025-07-02 Kert Tamm , Tanel Peets , Jüri Engelbrecht

Entanglement membrane theory is an effective coarse-grained description of entanglement dynamics and operator growth in chaotic quantum many-body systems. The fundamental quantity characterizing the membrane is the entanglement line…

Quantum Physics · Physics 2024-09-30 Michael A. Rampp , Suhail A. Rather , Pieter W. Claeys

In this work, we propose to catch the complexity of the membrane potential's dynamic of a motoneuron between its spikes, taking into account the spikes from other neurons around. Our approach relies on two types of data: extracellular…

Statistics Theory · Mathematics 2021-08-03 Anna Bonnet , Charlotte Dion , François Gindraud , Sarah Lemler

The spontaneous generation of electrical activity underpins a number of essential physiological processes, and is observed even in tissues where specialized pacemaker cells have not been identified. The emergence of periodic oscillations in…

Adaptation and Self-Organizing Systems · Physics 2022-02-01 Ria Ghosh , Shakti N. Menon

A parallel plate capacitor containing an electrolytic solution is the simplest model of a supercapacitor, or electric double layer capacitor. Using both analytical and numerical techniques, we solve the Poisson-Nernst-Planck equations for…

Soft Condensed Matter · Physics 2025-10-02 Ivan Palaia , Adelchi J. Asta , Megh Dutta , Patrick B. Warren , Benjamin Rotenberg , Emmanuel Trizac

We investigate the electromechanical actuation of a pair of suspended silicon nitride membranes forming a monolithic optomechanical array. By controlling the membrane resonators' tensile stress via a piezoelectrically controlled compressive…

Applied Physics · Physics 2019-08-09 Sepideh Naserbakht , Andreas Naesby , Aurélien Dantan

Elastic membranes composed of paramagnetic beads offer the possibility of assembling versatile actuators operated autonomously by external magnetic fields. Here we develop a theoretical framework to study shapes of such paramagnetic…

Soft Condensed Matter · Physics 2018-09-12 Pablo Vázquez-Montejo , Mónica Olvera de la Cruz

Voltage and charge distributions in cellular microdomains regulate communications, excitability, and signal transduction. We report here new electrical laws in a cell, which follow from a nonlinear electro-diffusion model. These newly…

Biological Physics · Physics 2017-01-03 Jerome Cartailler , Zeev Schuss , David Holcman

In this paper we study the electrostatic interaction of a heterogeneously charged wall with a neutral semipermeable membrane. The wall consists of periodic stripes, where the charge density varies in one direction. The membrane is in a…

Soft Condensed Matter · Physics 2017-02-08 Salim R. Maduar , Vladimir Lobaskin , Olga I. Vinogradova

Influence of mesoscopic channel noise on excitable dynamics of living cells became a hot subject within the last decade, and the traditional biophysical models of neuronal dynamics such as Hodgkin-Huxley model have been generalized to…

Neurons and Cognition · Quantitative Biology 2014-09-24 Igor Goychuk

The thermodynamic (TD) properties of biological membranes play a central role for living systems. It has been suggested, for instance, that nonlinear pulses such as action potentials (APs) can only exist if the membrane state is in vicinity…

Biological Physics · Physics 2020-07-16 Christian Fillafer , Anne Paeger , Matthias F. Schneider

In this work, we introduce a non-local five-moment electron pressure tensor closure parametrized by a Fully Convolutional Neural Network (FCNN). Electron pressure plays an important role in generalized Ohm's law, competing with electron…

We consider a continuum model of electrical signals in the human cortex, which takes the form of a system of semilinear, hyperbolic partial differential equations for the inhibitory and excitatory membrane potentials and the synaptic…

Neurons and Cognition · Quantitative Biology 2015-06-22 Lennaert van Veen , Kevin Green

Mathematical models for excitable cells are commonly based on cable theory, which considers a homogenized domain and spatially constant ionic concentrations. Although such models provide valuable insight, the effect of altered ion…

Computational Engineering, Finance, and Science · Computer Science 2019-11-11 A. J. Ellingsrud , A. Solbrå , G. T. Einevoll , G. Halnes , M. E. Rognes

Electromechanics in fluids describes the response of the number density to electric fields, and thus provides a powerful means by which to control the behavior of liquids. While continuum approaches have proven successful in describing…

Soft Condensed Matter · Physics 2025-07-10 Anna T. Bui , Stephen J. Cox