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Motivated by theoretical advancements in dimensionality reduction techniques we use a recent model, called Block Markov Chains, to conduct a practical study of clustering in real-world sequential data. Clustering algorithms for Block Markov…

Machine Learning · Computer Science 2022-10-05 Alexander Van Werde , Albert Senen-Cerda , Gianluca Kosmella , Jaron Sanders

The rapid development of high-throughput sequencing technologies has led to an explosive increase in biological sequence data, making sequence clustering a fundamental task in large-scale bioinformatics analyses. Unlike traditional…

Genomics · Quantitative Biology 2026-01-22 Simeng Zhang , Xinying Liu , Jun Lou , Mudi Jiang , Quan Zou , Zengyou He

Machine learning and in particular deep learning algorithms are the emerging approaches to data analysis. These techniques have transformed traditional data mining-based analysis radically into a learning-based model in which existing data…

Machine Learning · Computer Science 2020-04-17 Neda Tavakoli , Sima Siami-Namini , Mahdi Adl Khanghah , Fahimeh Mirza Soltani , Akbar Siami Namin

Co-clustering is a specific type of clustering that addresses the problem of finding groups of objects without necessarily considering all attributes. This technique has shown to have more consistent results in high-dimensional sparse data…

Machine Learning · Computer Science 2021-10-28 Yuri Santos , Jônata Tyska , Vania Bogorny

Inducing latent tree structures from sequential data is an emerging trend in the NLP research landscape today, largely popularized by recent methods such as Gumbel LSTM and Ordered Neurons (ON-LSTM). This paper proposes FASTTREES, a new…

Computation and Language · Computer Science 2021-11-30 Bill Tuck Weng Pung , Alvin Chan

Clustering is a widely used technique in data mining applications for discovering patterns in underlying data. Most traditional clustering algorithms are limited to handling datasets that contain either numeric or categorical attributes.…

Artificial Intelligence · Computer Science 2007-05-23 Zengyou He , Xiaofei Xu , Shengchun Deng

We present a structural clustering algorithm for large-scale datasets of small labeled graphs, utilizing a frequent subgraph sampling strategy. A set of representatives provides an intuitive description of each cluster, supports the…

Databases · Computer Science 2016-10-03 Till Schäfer , Petra Mutzel

We propose a new anytime hierarchical clustering method that iteratively transforms an arbitrary initial hierarchy on the configuration of measurements along a sequence of trees we prove for a fixed data set must terminate in a chain of…

Machine Learning · Statistics 2014-04-15 Omur Arslan , Daniel E. Koditschek

Despite the fundamental importance of clustering, to this day, much of the relevant research is still based on ambiguous foundations, leading to an unclear understanding of whether or how the various clustering methods are connected with…

Machine Learning · Computer Science 2025-01-29 Yorgos Tsitsikas , Evangelos E. Papalexakis

Sequence labeling models often benefit from incorporating external knowledge. However, this practice introduces data heterogeneity and complicates the model with additional modules, leading to increased expenses for training a…

Computation and Language · Computer Science 2025-06-19 Xuemei Tang , Jun Wang , Qi Su , Chu-ren Huang , Jinghang Gu

Time series clustering is the process of grouping time series with respect to their similarity or characteristics. Previous approaches usually combine a specific distance measure for time series and a standard clustering method. However,…

Cluster analysis is one of the essential tasks in data mining and knowledge discovery. Each type of data poses unique challenges in achieving relatively efficient partitioning of the data into homogeneous groups. While the algorithms for…

Machine Learning · Computer Science 2018-12-11 Ruben A. Gevorgyan , Yenok B. Hakobyan

This paper presents SeqClusFD, a top-down sequential clustering method for functional data. The clustering algorithm extracts the splitting information either from trajectories, first or second derivatives. Initial partition is based on gap…

Methodology · Statistics 2023-12-29 Ana Justel , Marcela Svarc

Clustering is an important data mining technique that groups similar data records, recently categorical transaction clustering is received more attention. In this research, we study the problem of categorical data clustering for…

Databases · Computer Science 2017-05-03 Mahmoud Mahdi , Samir Abdelrahman , Reem Bahgat , Ismail Ismail

Clustering is a fundamental approach to understanding data patterns, wherein the intuitive Euclidean distance space is commonly adopted. However, this is not the case for implicit cluster distributions reflected by qualitative attribute…

Machine Learning · Statistics 2026-03-05 Mingjie Zhao , Sen Feng , Yiqun Zhang , Mengke Li , Yang Lu , Yiu-ming Cheung

With the increasing prevalence of scalable file systems in the context of High Performance Computing (HPC), the importance of accurate anomaly detection on runtime logs is increasing. But as it currently stands, many state-of-the-art…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-01-20 Chris Egersdoerfer , Dong Dai , Di Zhang

Mining Time Series data has a tremendous growth of interest in today's world. To provide an indication various implementations are studied and summarized to identify the different problems in existing applications. Clustering time series is…

Information Retrieval · Computer Science 2010-05-25 V. Kavitha , M. Punithavalli

Sequence classification is an important data mining task in many real world applications. Over the past few decades, many sequence classification methods have been proposed from different aspects. In particular, the pattern-based method is…

Machine Learning · Computer Science 2020-12-15 Zengyou He , Guangyao Xu , Chaohua Sheng , Bo Xu , Quan Zou

Given the potential difficulties in obtaining large quantities of labelled data, many works have explored the use of deep semi-supervised learning, which uses both labelled and unlabelled data to train a neural network architecture. The…

Machine Learning · Computer Science 2021-09-02 Philip Sellars , Angelica Aviles-Rivero , Carola Bibiane Schönlieb

Cluster analysis has proved to be an invaluable tool for the exploratory and unsupervised analysis of high dimensional datasets. Among methods for clustering, hierarchical approaches have enjoyed substantial popularity in genomics and other…

Methodology · Statistics 2014-11-20 Patrick K. Kimes , Yufeng Liu , D. Neil Hayes , J. S. Marron