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Fiber tractography is an important tool of computational neuroscience that enables reconstructing the spatial connectivity and organization of white matter of the brain. Fiber tractography takes advantage of diffusion Magnetic Resonance…

Image and Video Processing · Electrical Eng. & Systems 2020-09-08 Tomer Weiss , Sanketh Vedula , Ortal Senouf , Oleg Michailovich , AlexBronstein

Early and accurate assessment of brain microstructure using diffusion Magnetic Resonance Imaging (dMRI) is crucial for identifying neurodevelopmental disorders in neonates, but remains challenging due to low signal-to-noise ratio (SNR),…

Computer Vision and Pattern Recognition · Computer Science 2025-10-15 Haykel Snoussi , Davood Karimi

Diffusion-weighted (DW) MRI measures the direction and scale of the local diffusion process in every voxel through its spectrum in q-space, typically acquired in one or more shells. Recent developments in micro-structure imaging and…

Spherical data is found in many applications. By modeling the discretized sphere as a graph, we can accommodate non-uniformly distributed, partial, and changing samplings. Moreover, graph convolutions are computationally more efficient than…

Machine Learning · Computer Science 2019-04-11 Michaël Defferrard , Nathanaël Perraudin , Tomasz Kacprzak , Raphael Sgier

The success of convolutional networks in learning problems involving planar signals such as images is due to their ability to exploit the translation symmetry of the data distribution through weight sharing. Many areas of science and…

Machine Learning · Computer Science 2019-04-23 Taco Cohen , Mario Geiger , Jonas Köhler , Max Welling

We present a novel method for estimation of the fiber orientation distribution (FOD) function based on diffusion-weighted Magnetic Resonance Imaging (D-MRI) data. We formulate the problem of FOD estimation as a regression problem through…

Applications · Statistics 2016-12-23 Hao Yan , Owen Carmichael , Debashis Paul , Jie Peng

Blind deconvolution is the problem of recovering a convolutional kernel $\boldsymbol a_0$ and an activation signal $\boldsymbol x_0$ from their convolution $\boldsymbol y = \boldsymbol a_0 \circledast \boldsymbol x_0$. This problem is…

Computer Vision and Pattern Recognition · Computer Science 2019-01-08 Yuqian Zhang , Yenson Lau , Han-Wen Kuo , Sky Cheung , Abhay Pasupathy , John Wright

Constrained Spherical Deconvolution (CSD) is widely used to estimate the white matter fiber orientation distribution (FOD) from diffusion MRI data. Its angular resolution depends on the maximum spherical harmonic order ($l_{max}$): low…

Multi-channel sparse blind deconvolution, or convolutional sparse coding, refers to the problem of learning an unknown filter by observing its circulant convolutions with multiple input signals that are sparse. This problem finds numerous…

Machine Learning · Statistics 2021-04-07 Laixi Shi , Yuejie Chi

Our understanding of the human connectome is fundamentally limited by the resolution of diffusion MR images. Reconstructing a connectome's constituent neural pathways with tractography requires following a continuous field of fiber…

Computer Vision and Pattern Recognition · Computer Science 2023-12-12 Tyler Spears , P. Thomas Fletcher

A fundamental problem faced by object recognition systems is that objects and their features can appear in different locations, scales and orientations. Current deep learning methods attempt to achieve invariance to local translations via…

Computer Vision and Pattern Recognition · Computer Science 2017-12-12 Dimitrios C. Gklezakos , Rajesh P. N. Rao

Expansion of diffusion MRI (dMRI) both into the realm of strong gradients, and into accessible imaging with portable low-field devices, brings about the challenge of gradient nonlinearities. Spatial variations of the diffusion gradients…

Diffusion MRI (dMRI) is sensitive to microstructural barriers, yet most existing methods either assume impermeable boundaries or estimate voxel-level parameters without recovering explicit interfaces. We present Spinverse, a…

Computer Vision and Pattern Recognition · Computer Science 2026-03-06 Prathamesh Pradeep Khole , Mario M. Brenes , Zahra Kais Petiwala , Ehsan Mirafzali , Utkarsh Gupta , Jing-Rebecca Li , Andrada Ianus , Razvan Marinescu

Axons in white matter have been shown to have varying geometries within a bundle using ex vivo imaging techniques, but what does this mean for diffusion MRI (dMRI) based spherical deconvolution (SD)? SD attempts to estimate the fibre…

Medical Physics · Physics 2022-03-04 Ross Callaghan , Daniel C. Alexander , Marco Palombo , Hui Zhang

Diffusion-weighted Magnetic Resonance Imaging (dMRI) is an essential tool in neuroimaging. It is arguably the sole noninvasive technique for examining the microstructural properties and structural connectivity of the brain. Recent years…

Image and Video Processing · Electrical Eng. & Systems 2025-03-13 Tianyuan Yao , Zhiyuan Li , Praitayini Kanakaraj , Derek B. Archer , Kurt Schilling , Lori Beason-Held , Susan Resnick , Bennett A. Landman , Yuankai Huo

Multichannel blind deconvolution is the problem of recovering an unknown signal $f$ and multiple unknown channels $x_i$ from their circular convolution $y_i=x_i \circledast f$ ($i=1,2,\dots,N$). We consider the case where the $x_i$'s are…

Information Theory · Computer Science 2019-03-19 Yanjun Li , Yoram Bresler

Diffusion MRI (dMRI) provides the ability to reconstruct neuronal fibers in the brain, $\textit{in vivo}$, by measuring water diffusion along angular gradient directions in q-space. High angular resolution diffusion imaging (HARDI) can…

Machine Learning · Statistics 2018-05-30 Evan Schwab , René Vidal , Nicolas Charon

Controllable spherical panoramic image generation holds substantial applicative potential across a variety of domains.However, it remains a challenging task due to the inherent spherical distortion and geometry characteristics, resulting in…

Computer Vision and Pattern Recognition · Computer Science 2024-03-18 Tao Wu , Xuewei Li , Zhongang Qi , Di Hu , Xintao Wang , Ying Shan , Xi Li

Due to the current lack of large-scale datasets at the million-scale level, tasks involving panoramic images predominantly rely on existing two-dimensional pre-trained image benchmark models as backbone networks. However, these networks are…

Computer Vision and Pattern Recognition · Computer Science 2025-07-15 Jingguo Liu , Han Yu , Shigang Li , Jianfeng Li

The functional and structural representation of the brain as a complex network is marked by the fact that the comparison of noisy and intrinsically correlated high-dimensional structures between experimental conditions or groups shuns…

Neurons and Cognition · Quantitative Biology 2013-10-25 Tommaso Furlanello , Marco Cristoforetti , Cesare Furlanello , Giuseppe Jurman