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The codons, sixtyfour in number, are distributed over the coding parts of DNA sequences. The distribution function is the plot of frequency-versus-rank of the codons. These distributions are characterised by parameters that are almost…

Biological Physics · Physics 2009-11-07 A. Som , S. Chattopadhyay , J. Chakrabarti , D. Bandyopadhyay

In this work, we generalize the four circulant construction for self-dual codes. By applying the constructions over the alphabets F_2, F_2 + uF_2, F_4+uF_4, we were able to obtain extremal binary self-dual codes of lengths 40, 64 including…

Combinatorics · Mathematics 2019-12-30 Joe Gildea , Abidin Kaya , Bahattin Yildiz

In this paper, we develop the theory of convolutional codes over finite commutative chain rings. In particular, we focus on maximum distance profile (MDP) convolutional codes and we provide a characterization of these codes, generalizing…

Information Theory · Computer Science 2022-03-31 Gianira N. Alfarano , Anina Gruica , Julia Lieb , Joachim Rosenthal

In this paper, we present a new bordered construction for self-dual codes which employs $\lambda$-circulant matrices. We give the necessary conditions for our construction to produce self-dual codes over a finite commutative Frobenius ring…

Information Theory · Computer Science 2023-03-24 Joe Gildea , Adrian Korban , Adam Michael Roberts , Alexander Tylyshchak

Let $q$ be a prime power and let $\mathcal{R}=\mathbb{F}_{q}[u_1,u_2, \cdots, u_k]/\langle f_i(u_i),u_iu_j-u_ju_i\rangle$ be a finite non-chain ring, where $f_i(u_i), 1\leq i \leq k$ are polynomials, not all linear, which split into…

Information Theory · Computer Science 2022-12-07 Swati Bhardwaj , Mokshi Goyal , Madhu Raka

We construct an infinite family of two-Lee-weight and three-Lee-weight codes over the chain ring $\mathbb{F}_p+u\mathbb{F}_p.$ They have the algebraic structure of abelian codes. Their Lee weight distribution is computed by using Gauss…

Information Theory · Computer Science 2017-01-05 Minjia Shi , Yan Liu , Patrick Solé

We study quasi-cyclic codes of index 2 over finite fields. We give a classification of such codes. Their duals with respect to the Euclidean, symplectic and Hermitian inner products are investigated. We describe self-orthogonal and…

Information Theory · Computer Science 2026-01-21 Kanat Abdukhalikov , Askar S. Dzhumadil'daev , San Ling

Let $\mathbb{F}_q$ be a finite field with $q$ elements and denote by $\theta : \mathbb{F}_q\to\mathbb{F}_q$ an automorphism of $\mathbb{F}_q$. In this paper, we deal with skew constacyclic codes, that is, linear codes of $\mathbb{F}_q^n$…

Information Theory · Computer Science 2018-06-11 Alexis E. Almendras Valdebenito , Andrea Luigi Tironi

The sequence-dependent elasticity of double-helical DNA on a nm length scale can be captured by the rigid base-pair model, whose strains are the relative position and orientation of adjacent base-pairs. Corresponding elastic potentials have…

Biomolecules · Quantitative Biology 2013-05-29 Nils B. Becker , Ralf Everaers

In this paper, we define dual codes over arbitrary finite rings with respect to arbitrary bilinear forms and provide a generalization of Hayden's theorem (Bridges, Hall, and Hayden, 1981). Building on this foundation, we introduce the…

Combinatorics · Mathematics 2026-05-05 Futo Takabayashi

By starting from the four DNA bases order in the Boolean lattice, a novel Lie Algebra of the genetic code is proposed. Here, the principal partitions of the genetic code table were obtained as equivalent classes of quotient subspaces of the…

Quantitative Methods · Quantitative Biology 2007-05-23 Robersy Sanchez , Ricardo Grau

We show that there are good long binary generalized quasi-cyclic self-dual (either Type I or Type II) codes.

Information Theory · Computer Science 2016-01-12 MinJia Shi , Yan Liu , Patrick Solé

In this work, we apply the idea of composite matrices arising from group rings to derive a number of different techniques for constructing self-dual codes over finite commutative Frobenius rings. By applying these techniques over different…

Combinatorics · Mathematics 2023-01-18 Joe Gildea , Adrian Korban , Adam Michael Roberts

Let $A=\frac{\mathbb{F}[x]}{\langle f(x)\rangle }$, where $f(x)$ is a monic polynomial over a finite field $\mathbb{F}$. In this paper, we study the relation between $A$-codes and their duals. In particular, we state a counterexample and a…

Information Theory · Computer Science 2017-05-30 Ashkan Nikseresht

Let $\mathbb{F}_q$ be a finite field with $q$ elements and denote by $\theta : \mathbb{F}_q\to\mathbb{F}_q$ an automorphism of $\mathbb{F}_q$. In this paper, we deal with linear codes of $\mathbb{F}_q^n$ invariant under a semi-linear map…

Information Theory · Computer Science 2013-12-02 Luis Felipe Tapia Cuitiño , Andrea Luigi Tironi

Self-dual codes over finite fields and over some finite rings have been of interest and extensively studied due to their nice algebraic structures and wide applications. Recently, characterization and enumeration of Euclidean self-dual…

Information Theory · Computer Science 2019-09-10 Parinyawat Choosuwan , Somphong Jitman

In this article, we construct linear codes over the commutative non-unital ring $I$ of size four. We obtain their Lee-weight distributions and study their binary Gray images. Under certain mild conditions, these classes of binary codes are…

Information Theory · Computer Science 2023-09-20 Vidya Sagar , Ritumoni Sarma

This paper presents four new classes of binary quantum codes with minimum dis- tance 3 and 4, namely Class-I, Class-II, Class-III and Class-IV. The classes Class-I and Class-II are constructed based on self-dual orientable embeddings of the…

Quantum Physics · Physics 2015-07-07 Avaz Naghipour , Mohammad Ali Jafarizadeh , Sedaghat Shahmorad

In this note, we give basic properties of ternary four-negacirculant self-dual codes. By exhaustive computer search based on the properties, we complete a classification of ternary extremal four-negacirculant self-dual codes of lengths 40,…

Combinatorics · Mathematics 2023-06-21 Masaaki Harada , Keita Ishizuka , Hadi Kharaghani

Generalized quasi-cyclic (GQC) codes with arbitrary lengths over the ring $\mathbb{F}_{q}+u\mathbb{F}_{q}$, where $u^2=0$, $q=p^n$, $n$ a positive integer and $p$ a prime number, are investigated. By the Chinese Remainder Theorem,…

Information Theory · Computer Science 2013-07-09 Jian Gao , Fang-Wei Fu , Linzhi Shen