Related papers: Optimizing Safe Flow Decompositions in DAGs
Decomposing a network flow into weighted paths has numerous applications. Some applications require any decomposition that is optimal w.r.t. some property such as number of paths, robustness, or length. Many bioinformatic applications…
In Bioinformatics, the applications of flow decomposition in directed acyclic graphs are highlighted in RNA Assembly problem. However, it admits multiple solutions where exactly one solution correctly represents the underlying transcripts.…
Minimum flow decomposition (MFD) is the strongly NP-hard problem of finding a smallest set of integer weighted $s$-$t$ paths in an $s$-$t$ DAG $G$ whose weighted sum is equal to a given flow $f$ on $G$. Despite its many practical…
We present a combinatorial algorithm for computing exact maximum flows in directed graphs with $n$ vertices and edge capacities from $\{1,\dots,U\}$ in $n^{2+o(1)}\log U$ time, which is almost optimal in dense graphs. Our algorithm is a…
We show that every directed graph $G$ with $n$ vertices and $m$ edges admits a directed acyclic graph (DAG) with $m^{1+o(1)}$ edges, called a DAG projection, that can either $(1+1/\text{polylog} (n))$-approximate distances between all pairs…
We give an algorithm that computes exact maximum flows and minimum-cost flows on directed graphs with $m$ edges and polynomially bounded integral demands, costs, and capacities in $m^{1+o(1)}$ time. Our algorithm builds the flow through a…
Minimum flow decomposition (MFD) is the NP-hard problem of finding a smallest decomposition of a network flow/circulation $X$ on a directed graph $G$ into weighted source-to-sink paths whose superposition equals $X$. We show that, for…
We consider the problem of finding the value of a maximum flow over time in a network with uniform edge lengths where the edge capacities change at specific time instants. To solve this problem, we show how to construct a condensed version…
In this paper we provide an algorithm which given any $m$-edge $n$-vertex directed graph with integer capacities at most $U$ computes a maximum $s$-$t$ flow for any vertices $s$ and $t$ in $m^{11/8+o(1)}U^{1/4}$ time with high probability.…
In this paper, we present an improved algorithm for the maximum flow problem on general networks with $n$ vertices and $m$ arcs. We show how to solve the problem in $O(mn)$ time, when $m = O(n^{2-\epsilon})$, for some $0 <\epsilon \leq 1$.…
In this paper, we generalize the minimum flow decomposition problem (MFD) to incorporate uncertain edge capacities and tackle it from the perspective of robust optimization. In the classical flow decomposition problem, a network flow is…
Connectivity (or equivalently, unweighted maximum flow) is an important measure in graph theory and combinatorial optimization. Given a graph $G$ with vertices $s$ and $t$, the connectivity $\lambda(s,t)$ from $s$ to $t$ is defined to be…
We investigate the time-complexity of the All-Pairs Max-Flow problem: Given a graph with $n$ nodes and $m$ edges, compute for all pairs of nodes the maximum-flow value between them. If Max-Flow (the version with a given source-sink pair…
We study a network utility maximization (NUM) decomposition in which the set of flow rates is grouped by source-destination pairs. We develop theorems for both single-path and multipath cases, which relate an arbitrary NUM problem involving…
A decomposition algorithm for solving large-scale security-constrained AC optimal power flow problems is presented. The formulation considered is the one used in the ARPA-E Grid Optimization (GO) Competition, Challenge 1, held from November…
In this paper we present an $\tilde{O}(m\sqrt{n}\log^{O(1)}U)$ time algorithm for solving the maximum flow problem on directed graphs with $m$ edges, $n$ vertices, and capacity ratio $U$. This improves upon the previous fastest running time…
In this paper, we develop an $O((m \log k) {\rm MSF} (n,m,1))$-time algorithm to find a half-integral node-capacitated multiflow of the maximum total flow-value in a network with $n$ nodes, $m$ edges, and $k$ terminals, where ${\rm MSF}…
We introduce a new approach to computing an approximately maximum s-t flow in a capacitated, undirected graph. This flow is computed by solving a sequence of electrical flow problems. Each electrical flow is given by the solution of a…
We study the influence of a graph parameter called modular-width on the time complexity for optimally solving well-known polynomial problems such as Maximum Matching, Triangle Counting, and Maximum $s$-$t$ Vertex-Capacitated Flow. The…
Many important problems in Bioinformatics (e.g., assembly or multi-assembly) admit multiple solutions, while the final objective is to report only one. A common approach to deal with this uncertainty is finding safe partial solutions (e.g.,…