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Related papers: Phase field models of active matter

200 papers

We present a generic framework for describing interacting, spinning, active polar particles, aimed at modelling dense cell aggregates, where cells are treated as polar, rotating objects that interact mechanically with one another and their…

Soft Condensed Matter · Physics 2024-11-01 Quentin Vagne , Guillaume Salbreux

We propose and study a simple, physical model for phagocytosis, i.e. the active, actin-mediated uptake of micron-sized particles by biological cells. The cell is described by the phase field method and the driving mechanisms of uptake are…

Soft Condensed Matter · Physics 2023-10-13 Benjamin Winkler , Mohammad Abu Hamed , Alexander A. Nepomnyashchy , Falko Ziebert

In this work, we present a variational and quantitative phase-field model for non-isothermal sintering processes. The model is derived via an extended non-diagonal phase-field model. The model evolution equations have naturally…

Materials Science · Physics 2023-08-10 Timileyin David Oyedeji , Yangyiwei Yang , Herbert Egger , Bai-Xiang Xu

As the study of active matter has developed into one of the most rapidly growing subfields of condensed matter physics, more and more kinds of physical systems have been included in this framework. While the word 'active' is often thought…

Soft Condensed Matter · Physics 2025-07-30 Michael te Vrugt , Benno Liebchen , Michael E. Cates

We use a simple model to extend network models for activated dynamics to a continuous landscape with a well-defined notion of distance and a direct connection to many-body systems. The model consists of a tracer in a high-dimensional funnel…

Disordered Systems and Neural Networks · Physics 2020-05-13 Matthew R. Carbone , Valerio Astuti , Marco Baity-Jesi

We extend the Cahn-Landau-de Gennes mean field theory of binary mixtures to understand the wetting thermodynamics of a three phase system, that is in contact with an external surface which prefers one of the phases. We model the system…

Soft Condensed Matter · Physics 2020-12-01 Biswaroop Mukherjee , Buddhapriya Chakrabarti

The biological membrane, which compartmentalizes the cell and its organelles, exhibit wide variety of macroscopic shapes of varying morphology and topology. A systematic understanding of the relation of membrane shapes to composition,…

Biological Physics · Physics 2011-09-23 N. Ramakrishnan , P. B. Sunil Kumar , John H. Ipsen

The self-organization of proteins into enriched compartments and the formation of complex patterns are crucial processes for life on the cellular level. Liquid-liquid phase separation is one mechanism for forming such enriched compartments.…

Soft Condensed Matter · Physics 2025-04-07 Antonia Winter , Yuhao Liu , Alexander Ziepke , George Dadunashvili , Erwin Frey

Growing experimental evidence shows that cell monolayers can induce long-lived perturbations to their environment, akin to footprints, which in turn influence the global dynamics of the system. Inspired by these observations, we propose a…

Soft Condensed Matter · Physics 2024-09-10 Samuel Bell , Joseph Ackermann , Ananyo Maitra , Raphael Voituriez

A distinguishing feature of a multicellular living system is that it operates at various scales, from the intracellular to organismal. Very little is known at present on how tissue level properties are related to cell and subcellular…

Biological Physics · Physics 2007-06-26 Elijah Flenner , Francoise Marga , Adrian Neagu , Ioan Kosztin , Gabor Forgacs

A coupled phase-field and hydrodynamic model is introduced to describe a two-phase, weakly compressible smectic (layered phase) in contact with an isotropic fluid of different density. A non-conserved smectic order parameter is coupled to a…

Soft Condensed Matter · Physics 2022-02-02 Eduardo Vitral , Perry H. Leo , Jorge Viñals

The phase field fracture method has emerged as a promising computational tool for modelling a variety of problems including, since recently, hydrogen embrittlement and stress corrosion cracking. In this work, we demonstrate the potential of…

Applied Physics · Physics 2020-11-17 P. K. Kristensen , C. F. Niordson , E. Martínez-Pañeda

We investigate the generalized contact process with two absorbing states in one space dimension by means of large-scale Monte-Carlo simulations. Treating the creation rate of active sites between inactive domains as an independent parameter…

Statistical Mechanics · Physics 2010-06-22 Man Young Lee , Thomas Vojta

We investigate dynamics of large scale and slow deformations of layered structures. Starting from the respective model equations for a non-conserved system, a conserved system and a binary fluid, we derive the interface equations which are…

Soft Condensed Matter · Physics 2009-10-30 Takao Ohta , David Jasnow

We formulate a simple effective model to describe molecular interactions in a lipid monolayer. The model represents lipid molecules in terms of two-dimensional anisotropic particles on the plane of the monolayer. These particles interact…

Soft Condensed Matter · Physics 2019-10-02 E. Velasco , L. Mederos

The kinetics of an initially undercooled solid-liquid melt is studied by means of a generalized Phase Field model, which describes the dynamics of an ordering non-conserved field phi (e.g. solid-liquid order parameter) coupled to a…

Condensed Matter · Physics 2009-10-30 Umberto Marini Bettolo Marconi , Andrea Crisanti , Giulia Iori

Active systems, which are driven out of equilibrium by local non-conservative forces, exhibit unique behaviors and structures with potential utility for the design of novel materials. An important and difficult challenge along the path…

Soft Condensed Matter · Physics 2022-08-09 Laura Tociu , Gregory Rassolov , Étienne Fodor , Suriyanarayanan Vaikuntanathan

We investigate the steady-state organisation of active particles residing on an interface. Particle activity induces interface deformations, while the local shape of the interface guides particle movement. We consider multiple species of…

Soft Condensed Matter · Physics 2025-05-28 Love Grover , Rajeev Kapri , Abhishek Chaudhuri

We develop a model describing the behavior of two-phase ferrofluid flows using phase field-techniques and present an energy-stable numerical scheme for it. For a simplified, yet physically realistic, version of this model and the…

Numerical Analysis · Mathematics 2016-08-24 Ricardo H. Nochetto , Abner J. Salgado , Ignacio Tomas

We consider a system of two PDEs arising in modeling of motility of eukariotic cells on substrates. This system consists of the Allen-Cahn equation for the scalar phase field function coupled with another vectorial parabolic equation for…

Analysis of PDEs · Mathematics 2016-06-24 Leonid Berlyand , Volodymyr Rybalko , Mykhailo Potomkin