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Many of today's probabilistic programming languages (PPLs) have brittle inference performance: the performance of the underlying inference algorithm is very sensitive to the precise way in which the probabilistic program is written. A…

Artificial Intelligence · Computer Science 2023-02-22 Ellie Y. Cheng , Todd Millstein , Guy Van den Broeck , Steven Holtzen

Probabilistic programming is perfectly suited to reliable and transparent data science, as it allows the user to specify their models in a high-level language without worrying about the complexities of how to fit the models. Static analysis…

Artificial Intelligence · Computer Science 2020-08-31 Ryan Bernstein , Matthijs Vákár , Jeannette Wing

PiML (read $\pi$-ML, /`pai`em`el/) is an integrated and open-access Python toolbox for interpretable machine learning model development and model diagnostics. It is designed with machine learning workflows in both low-code and high-code…

Machine Learning · Computer Science 2023-12-21 Agus Sudjianto , Aijun Zhang , Zebin Yang , Yu Su , Ningzhou Zeng

Universal probabilistic programming languages (PPLs) make it relatively easy to encode and automatically solve statistical inference problems. To solve inference problems, PPL implementations often apply Monte Carlo inference algorithms…

Programming Languages · Computer Science 2024-04-08 Daniel Lundén , Lars Hummelgren , Jan Kudlicka , Oscar Eriksson , David Broman

Deep learning has had remarkable success in robotic perception, but its data-centric nature suffers when it comes to generalizing to ever-changing environments. By contrast, physics-based optimization generalizes better, but it does not…

Large Language Models (LLMs) are expected to produce safe, helpful, and honest content during interaction with human users, but they frequently fail to align with such values when given flawed instructions, e.g., missing context, ambiguous…

Computation and Language · Computer Science 2025-08-07 Feifan Song , Bofei Gao , Yifan Song , Yi Liu , Weimin Xiong , Yuyang Song , Tianyu Liu , Guoyin Wang , Houfeng Wang

The increasing importance of Computational Science and Engineering has highlighted the need for high-quality scientific software. However, research software development is often hindered by limited funding, time, staffing, and technical…

Software Engineering · Computer Science 2025-03-10 Armin Ariamajd , Raquel López-Ríos de Castro , Andrea Volkamer

Many machine learning applications require the ability to learn from and reason about noisy multi-relational data. To address this, several effective representations have been developed that provide both a language for expressing the…

Artificial Intelligence · Computer Science 2012-03-19 Matthias Brocheler , Lilyana Mihalkova , Lise Getoor

A large amount of data is produced every second from modern information systems such as mobile devices, the world wide web, Internet of Things, social media, etc. Analysis and mining of this massive data requires a lot of advanced tools and…

Machine Learning · Computer Science 2020-01-13 Rising Odegua , Festus Ikpotokin

Large Language Models (LLMs) have advanced rapidly as tools for automating code generation in scientific research, yet their ability to interpret and use unfamiliar Python APIs for complex computational experiments remains poorly…

Software Engineering · Computer Science 2025-09-17 Nuno Fachada , Daniel Fernandes , Carlos M. Fernandes , Bruno D. Ferreira-Saraiva , João P. Matos-Carvalho

Selecting artificial intelligence (AI) models, such as large language models (LLMs), from multiple candidates requires accurate performance estimation. This is ideally achieved through empirical evaluations involving abundant real-world…

Machine Learning · Statistics 2025-12-03 Sangwoo Park , Matteo Zecchin , Osvaldo Simeone

This work offers a broad perspective on probabilistic modeling and inference in light of recent advances in probabilistic programming, in which models are formally expressed in Turing-complete programming languages. We consider a typical…

Machine Learning · Statistics 2020-04-20 Lawrence M. Murray , Thomas B. Schön

We present new techniques for automatically constructing probabilistic programs for data analysis, interpretation, and prediction. These techniques work with probabilistic domain-specific data modeling languages that capture key properties…

Programming Languages · Computer Science 2019-07-16 Feras A. Saad , Marco F. Cusumano-Towner , Ulrich Schaechtle , Martin C. Rinard , Vikash K. Mansinghka

PyMOLfold is a flexible and open-source plugin designed to seamlessly integrate AI-based protein structure prediction and visualization within the widely used PyMOL molecular graphics system. By leveraging state-of-the-art protein folding…

Biomolecules · Quantitative Biology 2025-02-04 Colby T. Ford , Samee Ullah , Dinler Amaral Antunes , Tarsis Gesteira Ferreira

AI tasks encompass a wide range of domains and fields. While numerous AI models have been designed for specific tasks and applications, they often require considerable human efforts in finding the right model architecture, optimization…

Computation and Language · Computer Science 2023-05-05 Shujian Zhang , Chengyue Gong , Lemeng Wu , Xingchao Liu , Mingyuan Zhou

Compared to the wide array of advanced Monte Carlo methods supported by modern probabilistic programming languages (PPLs), PPL support for variational inference (VI) is less developed: users are typically limited to a predefined selection…

Programming Languages · Computer Science 2024-06-25 McCoy R. Becker , Alexander K. Lew , Xiaoyan Wang , Matin Ghavami , Mathieu Huot , Martin C. Rinard , Vikash K. Mansinghka

Personalized preference alignment for large language models (LLMs), the process of tailoring LLMs to individual users' preferences, is an emerging research direction spanning the area of NLP and personalization. In this survey, we present…

This thesis describes work on two applications of probabilistic programming: the learning of probabilistic program code given specifications, in particular program code of one-dimensional samplers; and the facilitation of sequential Monte…

Artificial Intelligence · Computer Science 2020-05-21 Yura N Perov

PyPose is an open-source library for robot learning. It combines a learning-based approach with physics-based optimization, which enables seamless end-to-end robot learning. It has been used in many tasks due to its meticulously designed…

Probabilistic programming languages (PPLs) are an expressive means of representing and reasoning about probabilistic models. The computational challenge of probabilistic inference remains the primary roadblock for applying PPLs in practice.…

Programming Languages · Computer Science 2020-10-19 Steven Holtzen , Guy Van den Broeck , Todd Millstein