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Quantifying interaction strengths between state variables in dynamical systems is essential for understanding ecological networks. Within the empirical dynamic modeling approach, multivariate S-map infers the interaction Jacobian from time…

Populations and Evolution · Quantitative Biology 2024-11-15 Takeshi Miki , Chun-Wei Chang , Po-Ju Ke , Arndt Telschow , Cheng-Han Tsai , Masayuki Ushio , Chih-hao Hsieh

Learning the dynamics of complex systems features a large number of applications in data science. Graph-based modeling and inference underpins the most prominent family of approaches to learn complex dynamics due to their ability to capture…

Signal Processing · Electrical Eng. & Systems 2018-07-06 Luis M. Lopez-Ramos , Daniel Romero , Bakht Zaman , Baltasar Beferull-Lozano

Based on the binary time series data of social infection dynamics, we propose a general framework to reconstruct 2-simplex complexes with two-body and three-body interactions by combining the maximum likelihood estimation in statistical…

Physics and Society · Physics 2023-07-25 Kaiwei Liu , Xing Lv , Fei Gao , Jiang Zhang

Networks can describe the structure of a wide variety of complex systems by specifying which pairs of entities in the system are connected. While such pairwise representations are flexible, they are not necessarily appropriate when the…

Social and Information Networks · Computer Science 2022-01-17 Jean-Gabriel Young , Giovanni Petri , Tiago P. Peixoto

We propose a novel method of detecting directed interactions of a general dynamic network from measured data. By repeating random state variable resetting of a target node and appropriately averaging over the measurable data, the pairwise…

Data Analysis, Statistics and Probability · Physics 2018-11-14 Rundong Shi , Changbao Deng , Shihong Wang

This article studies the estimation of latent community memberships from pairwise interactions in a network of $N$ nodes, where the observed interactions can be of arbitrary type, including binary, categorical, and vector-valued, and not…

Statistics Theory · Mathematics 2022-08-31 Konstantin Avrachenkov , Maximilien Dreveton , Lasse Leskelä

Revealing physical interactions in complex systems from observed collective dynamics constitutes a fundamental inverse problem in science. Current reconstruction methods require access to a system's model or dynamical data at a level of…

Physics and Society · Physics 2018-01-18 Mor Nitzan , Jose Casadiego , Marc Timme

Accessing the network through which a propagation dynamics diffuse is essential for understanding and controlling it. In a few cases, such information is available through direct experiments or thanks to the very nature of propagation data.…

Physics and Society · Physics 2020-12-15 Alfredo Braunstein , Alessandro Ingrosso , Anna Paola Muntoni

Ecological communities are composed of species interactions that respond to environmental fluctuations. Despite increasing evidence of temporal variation in these interactions, most theoretical frameworks remain rooted in static…

Complex networks are used to depict topological features of complex systems. The structure of a network characterizes the interactions among elements of the system, and facilitates the study of many dynamical processes taking place on it.…

Physics and Society · Physics 2012-06-22 Yan Zhang , Lin Wang , Yi-Qing Zhang , Xiang Li

Digital networks, mobile devices, and the possibility of mining the ever-increasing amount of digital traces that we leave behind in our daily activities are changing the way we can approach the study of human and social interactions.…

We present a scalable nonparametric Bayesian method to perform network reconstruction from observed functional behavior that at the same time infers the communities present in the network. We show that the joint reconstruction with…

Physics and Society · Physics 2019-09-23 Tiago P. Peixoto

Over the past two decades, complex network theory provided the ideal framework for investigating the intimate relationships between the topological properties characterizing the wiring of connections among a system's unitary components and…

Network reconstruction is fundamental to understanding the dynamical behaviors of the networked systems. Many systems, modeled by multiplex networks with various types of interactions, display an entirely different dynamical behavior…

Physics and Society · Physics 2020-01-28 Mincheng Wu , Jiming Chen , Shibo He , Youxian Sun , Shlomo Havlin , Jianxi Gao

Recent interest has developed around the problem of dynamic compressed sensing, or the recovery of time-varying, sparse signals from limited observations. In this paper, we study how the dynamics of recurrent networks, formulated as general…

Optimization and Control · Mathematics 2015-11-09 MohammadMehdi Kafashan , Anirban Nandi , ShiNung Ching

Human social interactions in local settings can be experimentally detected by recording the physical proximity and orientation of people. Such interactions, approximating face-to-face communications, can be effectively represented as time…

Physics and Society · Physics 2020-10-08 Giulia Cencetti , Federico Battiston , Bruno Lepri , Márton Karsai

In this article the problem of reconstructing the pattern of connection between agents from partial empirical data in a macro-economic model is addressed, given a set of behavioral equations. This systemic point of view puts the focus on…

General Economics · Economics 2019-01-30 Aurélien Hazan

Time series analysis has proven to be a powerful method to characterize several phenomena in biology, neuroscience and economics, and to understand some of their underlying dynamical features. Despite a plethora of methods have been…

Physics and Society · Physics 2023-03-01 Andrea Santoro , Federico Battiston , Giovanni Petri , Enrico Amico

We propose a conceptually novel method of reconstructing the topology of dynamical networks. By examining the correlation between the variable of one node and the derivative of another node, we derive a simple matrix equation yielding the…

Data Analysis, Statistics and Probability · Physics 2015-06-11 Zoran Levnajić

To quantify the fundamental evolution of time-varying networks, and detect abnormal behavior, one needs a notion of temporal difference that captures significant organizational changes between two successive instants. In this work, we…

Social and Information Networks · Computer Science 2017-08-17 Nathan D Monnig , Francois G Meyer