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Purpose: To design multi-disease classifiers for body CT scans for three different organ systems using automatically extracted labels from radiology text reports.Materials & Methods: This retrospective study included a total of 12,092…

Computer Vision and Pattern Recognition · Computer Science 2021-12-07 Fakrul Islam Tushar , Vincent M. D'Anniballe , Rui Hou , Maciej A. Mazurowski , Wanyi Fu , Ehsan Samei , Geoffrey D. Rubin , Joseph Y. Lo

Machine learning models for radiology benefit from large-scale data sets with high quality labels for abnormalities. We curated and analyzed a chest computed tomography (CT) data set of 36,316 volumes from 19,993 unique patients. This is…

Image and Video Processing · Electrical Eng. & Systems 2020-10-14 Rachel Lea Draelos , David Dov , Maciej A. Mazurowski , Joseph Y. Lo , Ricardo Henao , Geoffrey D. Rubin , Lawrence Carin

Training medical image analysis models requires large amounts of expertly annotated data which is time-consuming and expensive to obtain. Images are often accompanied by free-text radiology reports which are a rich source of information. In…

Chest x-rays are the most common radiology studies for diagnosing lung and heart disease. Hence, a system for automated pre-reporting of pathologic findings on chest x-rays would greatly enhance radiologists' productivity. To this end, we…

Image and Video Processing · Electrical Eng. & Systems 2020-06-15 Adora M. DSouza , Anas Z. Abidin , Axel Wismüller

Purpose: This study aims to evaluate the effectiveness of large language models (LLMs) in automating disease annotation of CT radiology reports. We compare a rule-based algorithm (RBA), RadBERT, and three lightweight open-weight LLMs for…

Extracting structured labels from radiology reports has been employed to create vision models to simultaneously detect several types of abnormalities. However, existing works focus mainly on the chest region. Few works have been…

Chest radiography is the most common radiographic examination performed in daily clinical practice for the detection of various heart and lung abnormalities. The large amount of data to be read and reported, with more than 100 studies per…

Computer Vision and Pattern Recognition · Computer Science 2021-04-22 Sebastian Gündel , Arnaud A. A. Setio , Florin C. Ghesu , Sasa Grbic , Bogdan Georgescu , Andreas Maier , Dorin Comaniciu

Chest X-ray (CXR) is the most common X-ray examination performed in daily clinical practice for the diagnosis of various heart and lung abnormalities. The large amount of data to be read and reported, with 100+ studies per day for a single…

Computer Vision and Pattern Recognition · Computer Science 2019-05-17 Sebastian Guendel , Florin C. Ghesu , Sasa Grbic , Eli Gibson , Bogdan Georgescu , Andreas Maier , Dorin Comaniciu

Chest radiography is one of the most common types of diagnostic radiology exams, which is critical for screening and diagnosis of many different thoracic diseases. Specialized algorithms have been developed to detect several specific…

Image and Video Processing · Electrical Eng. & Systems 2020-06-15 Hieu H. Pham , Tung T. Le , Dat Q. Tran , Dat T. Ngo , Ha Q. Nguyen

Classifying chest radiographs is a time-consuming and challenging task, even for experienced radiologists. This provides an area for improvement due to the difficulty in precisely distinguishing between conditions such as pleural effusion,…

Computer Vision and Pattern Recognition · Computer Science 2024-12-17 Maria Efimovich , Jayden Lim , Vedant Mehta , Ethan Poon

The extraction of labels from radiology text reports enables large-scale training of medical imaging models. Existing approaches to report labeling typically rely either on sophisticated feature engineering based on medical domain knowledge…

Computation and Language · Computer Science 2020-10-20 Akshay Smit , Saahil Jain , Pranav Rajpurkar , Anuj Pareek , Andrew Y. Ng , Matthew P. Lungren

Traditional methods of identifying pathologies in X-ray images rely heavily on skilled human interpretation and are often time-consuming. The advent of deep learning techniques has enabled the development of automated disease diagnosis…

Image and Video Processing · Electrical Eng. & Systems 2024-04-02 Dipkamal Bhusal , Sanjeeb Prasad Panday

In radiologists' routine work, one major task is to read a medical image, e.g., a CT scan, find significant lesions, and describe them in the radiology report. In this paper, we study the lesion description or annotation problem. Given a…

Computer Vision and Pattern Recognition · Computer Science 2019-04-30 Ke Yan , Yifan Peng , Veit Sandfort , Mohammadhadi Bagheri , Zhiyong Lu , Ronald M. Summers

The chest X-rays (CXRs) is one of the views most commonly ordered by radiologists (NHS),which is critical for diagnosis of many different thoracic diseases. Accurately detecting thepresence of multiple diseases from CXRs is still a…

Computer Vision and Pattern Recognition · Computer Science 2020-05-27 Hieu H. Pham , Tung T. Le , Dat T. Ngo , Dat Q. Tran , Ha Q. Nguyen

Deep learning has shown great promise in the ability to automatically annotate organs in magnetic resonance imaging (MRI) scans, for example, of the brain. However, despite advancements in the field, the ability to accurately segment…

Image and Video Processing · Electrical Eng. & Systems 2024-03-26 Cosmin Ciausu , Deepa Krishnaswamy , Benjamin Billot , Steve Pieper , Ron Kikinis , Andrey Fedorov

This paper addresses the challenges posed by the unstructured nature and high-dimensional semantic complexity of electronic health record texts. A deep learning method based on attention mechanisms is proposed to achieve unified modeling…

Computation and Language · Computer Science 2025-07-03 Ting Xu , Xiaoxiao Deng , Xiandong Meng , Haifeng Yang , Yan Wu

Chest radiography is a widely used imaging modality for thoracic disease diagnosis, yet its conventional interpretation remains time-consuming and heavily dependent on expert knowledge. While deep learning has improved diagnostic efficiency…

Computer Vision and Pattern Recognition · Computer Science 2026-05-06 Duy Nguyen Huu , Duy Hoang Khuong , Ngu Huynh Cong Viet

Deep learning models benefit from training with a large dataset (labeled or unlabeled). Following this motivation, we present an approach to learn a deep learning model for the automatic segmentation of Organs at Risk (OARs) in cervical…

Image and Video Processing · Electrical Eng. & Systems 2023-02-22 Monika Grewal , Dustin van Weersel , Henrike Westerveld , Peter A. N. Bosman , Tanja Alderliesten

The work discusses the use of machine learning algorithms for anomaly detection in medical image analysis and how the performance of these algorithms depends on the number of annotators and the quality of labels. To address the issue of…

Computer Vision and Pattern Recognition · Computer Science 2023-03-30 Hieu H. Pham , Khiem H. Le , Tuan V. Tran , Ha Q. Nguyen
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