Related papers: Optimal Construction of Hierarchical Overlap Graph…
In this paper, we relate the problem of finding a maximum clique to the intersection number of the input graph (i.e. the minimum number of cliques needed to edge cover the graph). In particular, we consider the maximum clique problem for…
A new network construction method is presented for building of scalable, high throughput, low latency networks. The method is based on the exact equivalence discovered between the problem of maximizing network throughput (measured as…
Computing the Euler genus of a graph is a fundamental problem in graph theory and topology. It has been shown to be NP-hard by [Thomassen '89] and a linear-time fixed-parameter algorithm has been obtained by [Mohar '99]. Despite extensive…
We study the Sum of Squares (SoS) Hierarchy with a view towards combinatorial optimization. We survey the use of the SoS hierarchy to obtain approximation algorithms on graphs using their spectral properties. We present a simplified proof…
We consider the problem of computing compact routing tables for a (weighted) planar graph $G:= (V, E,w)$ in the PRAM, CONGEST, and the novel HYBRID communication model. We present algorithms with polylogarithmic work and communication that…
Understanding how two tables overlap is useful for many data management tasks, but challenging because tables often differ in row and column orders and lack reliable metadata in practice. Prior work defines the largest rectangular overlap,…
Temporal graphs are graphs where the topology and/or other properties of the graph change with time. They have been used to model applications with temporal information in various domains. Problems on static graphs become more challenging…
Identifying palindromes in sequences has been an interesting line of research in combinatorics on words and also in computational biology, after the discovery of the relation of palindromes in the DNA sequence with the HIV virus. Efficient…
De novo DNA assembly is a fundamental task in Bioinformatics, and finding Eulerian paths on de Bruijn graphs is one of the dominant approaches to it. In most of the cases, there may be no one order for the de Bruijn graph that works well…
We consider the well-studied problem of finding a perfect matching in $d$-regular bipartite graphs with $2n$ vertices and $m = nd$ edges. While the best-known algorithm for general bipartite graphs (due to Hopcroft and Karp) takes $O(m…
Let H be a graph, and let C_H(G) be the number of (subgraph isomorphic) copies of H contained in a graph G. We investigate the fundamental problem of estimating C_H(G). Previous results cover only a few specific instances of this general…
$H$-Packing is the problem of finding a maximum number of vertex-disjoint copies of $H$ in a given graph $G$. $H$-Partition is the special case of finding a set of vertex-disjoint copies that cover each vertex of $G$ exactly once. Our goal…
The Subgraph Isomorphism problem is of considerable importance in computer science. We examine the problem when the pattern graph H is of bounded treewidth, as occurs in a variety of applications. This problem has a well-known algorithm via…
A graph theoretic approach is proposed for object shape representation in a hierarchical compositional architecture called Compositional Hierarchy of Parts (CHOP). In the proposed approach, vocabulary learning is performed using a hybrid…
We revisit Approximate Graph Propagation (AGP), a unified framework which captures various graph propagation tasks, such as PageRank, feature propagation in Graph Neural Networks (GNNs), and graph-based Retrieval-Augmented Generation (RAG).…
Dujmovi\'c et al (FOCS2019) recently proved that every planar graph $G$ is a subgraph of $H\boxtimes P$, where $\boxtimes$ denotes the strong graph product, $H$ is a graph of treewidth 8 and $P$ is a path. This result has found numerous…
In the Single Source Replacement Paths (SSRP) problem we are given a graph $G = (V, E)$, and a shortest paths tree $\widehat{K}$ rooted at a node $s$, and the goal is to output for every node $t \in V$ and for every edge $e$ in…
Consider an undirected weighted graph $G = (V,E,w)$. We study the problem of computing $(1+\epsilon)$-approximate shortest paths for $S \times V$, for a subset $S \subseteq V$ of $|S| = n^r$ sources, for some $0 < r \le 1$. We devise a…
$ $We study the $d$-Uniform Hypergraph Matching ($d$-UHM) problem: given an $n$-vertex hypergraph $G$ where every hyperedge is of size $d$, find a maximum cardinality set of disjoint hyperedges. For $d\geq3$, the problem of finding the…
For two independent Erd\H{o}s-R\'enyi graphs $\mathbf G(n,p)$, we study the maximal overlap (i.e., the number of common edges) of these two graphs over all possible vertex correspondence. We present a polynomial-time algorithm which finds a…