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Labeling of DNA molecules is a fundamental technique for DNA visualization and analysis. This process was mathematically modeled in [1], where the received sequence indicates the positions of the used labels. In this work, we develop error…

Information Theory · Computer Science 2025-11-04 Dganit Hanania , Eitan Yaakobi

Software redesign preserves functionality while improving quality attributes, but manual reuse of code and tests is costly and error-prone, especially in crossrepository redesigns. Focusing on static analyzers where cross-repo redesign…

Software Engineering · Computer Science 2026-04-13 Xiaowen Zhang , Huaien Zhang , Shin Hwei Tan

Scientific computing workflows generate enormous distributed data that is short-lived, yet critical for job completion time. This class of data is called intermediate data. A common way to achieve high data availability is to replicate…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-04-14 Zhe Zhang , Brian Bockelman , Derek Weitzel , David Swanson

Due to their sequential nature, traditional DNA synthesis methods are expensive in terms of time and resources. They also fabricate multiple copies of the same strand, introducing redundancy. This redundancy can be leveraged to enhance the…

Information Theory · Computer Science 2025-10-29 Frederik Walter , Yonatan Yehezkeally

Disassemblers are crucial in the analysis and modification of binaries. Existing works showing disassembler errors largely rely on practical implementation without specific guarantees and assume source code and compiler toolchains to…

Cryptography and Security · Computer Science 2025-07-08 Lambang Akbar Wijayadi , Yuancheng Jiang , Roland H. C. Yap , Zhenkai Liang , Zhuohao Liu

Distributed storage systems support failures of individual devices by the use of replication or erasure correcting codes. While erasure correcting codes offer a better storage efficiency than replication for similar fault tolerance, they…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-12-10 Nicolas Le Scouarnec

The explosion of the amount of data stored in cloud systems calls for more efficient paradigms for redundancy. While replication is widely used to ensure data availability, erasure correcting codes provide a much better trade-off between…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-03-16 Steve Jiekak , Anne-Marie Kermarrec , Nicolas Le Scouarnec , Gilles Straub , Alexandre Van Kempen

Generalized Reed-Solomon (RS) codes are a common choice for efficient, reliable error correction in memory and communications systems. These codes add $2t$ extra parity symbols to a block of memory, and can efficiently and reliably correct…

Information Theory · Computer Science 2024-05-28 Mike Hamburg , Eric Linstadt , Danny Moore , Thomas Vogelsang

We study linear exact repair for $(n,k,\ell)$ MDS array codes over $\mathbb{F}_q$, with redundancy $r=n-k$, in the regime where $q$, $r$, and $\ell$ are fixed and the code length $n$ varies. A recent projective counting argument gives a…

Information Theory · Computer Science 2026-04-21 Huawei Wu

Redundancy elimination is a key optimization direction, and loop nests are the main optimization target in modern compilers. Previous work on redundancy elimination of array computations in loop nests lacks universality. These approaches…

Performance · Computer Science 2025-06-30 Zixuan Wang , Liang Yuan , Xianmeng Jiang , Kun Li , Junmin Xiao , Yunquan Zhang

Erasure codes play an important role in storage systems to prevent data loss. In this work, we study a class of erasure codes called Multi-Erasure Locally Recoverable Codes (ME-LRCs) for storage arrays. Compared to previous related works,…

Information Theory · Computer Science 2017-09-29 Pengfei Huang , Eitan Yaakobi , Paul H. Siegel

Tree decompositions of graphs are of fundamental importance in structural and algorithmic graph theory. Planar decompositions generalise tree decompositions by allowing an arbitrary planar graph to index the decomposition. We prove that…

Combinatorics · Mathematics 2007-06-13 David R. Wood , Jan Arne Telle

Guess & Check (GC) codes are systematic binary codes that can correct multiple deletions, with high probability. GC codes have logarithmic redundancy in the length of the message $k$, and the encoding and decoding algorithms of these codes…

Information Theory · Computer Science 2019-05-01 Serge Kas Hanna , Salim El Rouayheb

Matrix multiplication over the real field constitutes a foundational operation in the training of deep learning models, serving as a computational cornerstone for both forward and backward propagation processes. However, the presence of…

Information Theory · Computer Science 2025-08-07 Hao Shi , Zhengyi Jiang , Zhongyi Huang , Bo Bai , Gong Zhang , Hanxu Hou

Insertion-deletion codes (insdel codes for short) are used for correcting synchronization errors in communications, and in other many interesting fields such as DNA storage, date analysis, race-track memory error correction and language…

Information Theory · Computer Science 2022-06-02 Qinqin Ji , Dabin Zheng , Hao Chen , Xiaoqiang Wang

Locally Decodable Codes (LDCs) are error-correcting codes for which individual message symbols can be quickly recovered despite errors in the codeword. LDCs for Hamming errors have been studied extensively in the past few decades, where a…

Information Theory · Computer Science 2025-12-30 Jeremiah Blocki , Kuan Cheng , Elena Grigorescu , Xin Li , Yu Zheng , Minshen Zhu

Coding for distributed storage gives rise to a new set of problems in coding theory related to the need of reducing inter-node communication in the system. A large number of recent papers addressed the problem of optimizing the total amount…

Information Theory · Computer Science 2017-06-02 Itzhak Tamo , Min Ye , Alexander Barg

Block codes are considered for improving the reliability of messages stored in a computer memory with both stuck-at defects and random errors. It is assumed that the side information about the state of the defects is available to the…

Information Theory · Computer Science 2026-05-22 Ivana Djurdjevic , Robert Mateescu , Cyril Guyot

We consider irregular product codes.In this class of codes, each codeword is represented by a matrix. The entries in each row (column) of the matrix should come from a component row (column) code. As opposed to (standard) product codes, we…

Information Theory · Computer Science 2012-06-12 Masoud Alipour , Omid Etesami , Ghid Maatouk , Amin Shokrollahi

A novel correction algorithm is proposed for multi-class classification problems with corrupted training data. The algorithm is non-intrusive, in the sense that it post-processes a trained classification model by adding a correction…

Machine Learning · Computer Science 2020-02-13 Jun Hou , Tong Qin , Kailiang Wu , Dongbin Xiu