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This paper is a summary of the theory of discrete embeddings introduced in [5]. A discrete embedding is an algebraic procedure associating a numerical scheme to a given ordinary differential equation. Lagrangian systems possess a…

Numerical Analysis · Mathematics 2016-01-20 Loïc Bourdin , Jacky Cresson , Isabelle Greff , Pierre Inizan

The idea of using fragment embedding to circumvent the high computational scaling of accurate electronic structure methods while retaining high accuracy has been a long-standing goal for quantum chemists. Traditional fragment embedding…

Chemical Physics · Physics 2022-10-11 Hong-Zhou Ye , Matthew Welborn , Nathan D. Ricke , Troy Van Voorhis

Plasmonic nanostructures significantly improve the performance of photoconductive devices (PCDs) in generating terahertz radiation. However, they are geometrically intricate and result in complicated electromagnetic (EM) field and carrier…

Numerical Analysis · Mathematics 2020-10-14 Liang Chen , Hakan Bagci

The Particle-In-Cell (PIC) method for plasma simulation tracks particle phase space information using particle and grid data structures. High computational costs in 2D and 3D device-scale PIC simulations necessitate parallelization, with…

Computational Physics · Physics 2025-06-27 Libn Varghese , Bhaskar Chaudhury , Miral Shah , Mainak Bandyopadhyay

We describe a charge-conserving scatter-gather algorithm for particle-in-cell simulations on unstructured grids. Charge conservation is obtained from first principles, i.e., without the need for any post-processing or correction steps. This…

Numerical Analysis · Mathematics 2016-05-04 Haksu Moon , Fernando L. Teixeira , Yuri A. Omelchenko

Particle methods are a ubiquitous tool for solving the Vlasov-Poisson equation in comoving coordinates, which is used to model the gravitational evolution of dark matter in an expanding universe. However, these methods are known to produce…

Cosmology and Nongalactic Astrophysics · Physics 2016-01-12 Andrew Myers , Phillip Colella , Brian Van Straalen

In this paper we investigate the application of pseudo-transient-continuation (PTC) schemes for the numerical solution of semilinear elliptic partial differential equations, with possible singular perturbations. We will outline a residual…

Numerical Analysis · Mathematics 2016-07-07 Mario Amrein , Thomas P. Wihler

Entity is a new-generation, fully open-source particle-in-cell (PIC) code developed to overcome key limitations in astrophysical plasma modeling, particularly the extreme separation of scales and the performance challenges associated with…

Symplectic integrators for Hamiltonian systems have been quite successful for studying few-body dynamical systems. These integrators are frequently derived using a formalism built on symplectic maps. There have been recent efforts to extend…

Plasma Physics · Physics 2017-05-10 Stephen D. Webb , Dan T. Abell , Nathan M. Cook , David L. Bruhwiler

This paper addresses the issue of structure-preserving discretization of open distributed-parameter systems with Hamiltonian dynamics. Employing the formalism of discrete exterior calculus, we introduce a simplicial Dirac structure as a…

Mathematical Physics · Physics 2012-02-28 Marko Seslija , Arjan van der Schaft , Jacquelien M. A. Scherpen

The hybrid kinetic-ion fluid-electron plasma model is widely used to study challenging multi-scale problems in space and laboratory plasma physics. Here, a novel conservative scheme for this model employing implicit particle-in-cell…

Plasma Physics · Physics 2022-04-13 A. Stanier , L. Chacon

This paper presents a novel 3-D full electromagnetic particle-in-cell (PIC) code called JefiPIC, which uses Jefimenko's equations as the electromagnetic (EM) field solver through a full-space integration method. Leveraging the power of…

Computational Physics · Physics 2023-12-27 Jiannan Chen , Jun-Jie Zhang , Xueming Li , Hai-Liang Qiao , Yongtao Zhao

Phoretic colloids self-propel thanks to surface flows generated in response to surface gradients (thermal, electrical, or chemical), that are self-induced and/or generated by other particles. Here we present a scalable and versatile…

Soft Condensed Matter · Physics 2024-07-29 Blaise Delmotte , Florencio Balboa Usabiaga

A new method to solve the Dirac equation on a 3D lattice is proposed, in which the variational collapse problem is avoided by the inverse Hamiltonian method and the fermion doubling problem is avoided by performing spatial derivatives in…

Nuclear Theory · Physics 2017-02-14 Z. X. Ren , S. Q. Zhang , J. Meng

We present a study of the standard plasma physics test, Landau damping, using the Particle-In-Cell (PIC) algorithm. The Landau damping phenomenon consists of the damping of small oscillations in plasmas without collisions. In the PIC…

Plasma Physics · Physics 2023-03-23 Daniel S. Finn , Matthew G. Knepley , Joseph V. Pusztay , Mark F. Adams

A new Particle-in-Cell (PIC) method, that conserves energy exactly, is presented. The particle equations of motion and the Maxwell's equations are differenced implicitly in time by the midpoint rule and solved concurrently by a…

Computational Physics · Physics 2015-05-30 Stefano Markidis , Giovanni Lapenta

We present a computational framework for modeling large-scale particle-laden flows in complex domains with the goal of enabling simulations in medical-image derived patient specific geometries. The framework is based on a volume-filtered…

Fluid Dynamics · Physics 2023-11-28 Abhilash Reddy Malipeddi , C. Alberto Figueroa , Jesse Capecelatro

The present paper is devoted to the convergence analysis of a class of asymptotic preserving particle schemes [Filbet \& Rodrigues, SIAM J. Numer. Anal., 54 (2) (2016)] for the Vlasov equation with a strong external magnetic field. In this…

Numerical Analysis · Mathematics 2020-03-23 Francis Filbet , Luis Miguel Rodrigues , Hamed Zakerzadeh

In this paper, we develop the theoretical foundations of discrete Dirac mechanics, that is, discrete mechanics of degenerate Lagrangian/Hamiltonian systems with constraints. We first construct discrete analogues of Tulczyjew's triple and…

Symplectic Geometry · Mathematics 2015-02-13 Melvin Leok , Tomoki Ohsawa

Hamiltonian and action principle (HAP) formulations of plasma physics are reviewed for the purpose of explaining structure preserving numerical algorithms. Geometric structures associated with and emergent from HAP formulations are…

Plasma Physics · Physics 2017-05-24 P. J. Morrison