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The strong capability of large language models (LLMs) has been applied to information extraction (IE) through either retrieval augmented prompting or instruction tuning (IT). However, the best way to incorporate information with LLMs for IE…

Computation and Language · Computer Science 2024-12-03 Tingyu Xie , Jian Zhang , Yan Zhang , Yuanyuan Liang , Qi Li , Hongwei Wang

To take advantage of recent and ongoing advances in large-scale computational methods, and to preserve the scientific data created by publicly funded research projects, data archives must be created as well as standards for specifying,…

Quantitative Methods · Quantitative Biology 2022-03-08 Arnaud Delorme , Dung Truong , Choonhan Youn , Subha Sivagnanam , Kenneth Yoshimoto , Russell A. Poldrack , Amit Majumdar , Scott Makeig

In recent years, the integration of Large Language Models (LLMs) into recommender systems has garnered interest among both practitioners and researchers. Despite this interest, the field is still emerging, and the lack of open-source R&D…

Information Retrieval · Computer Science 2024-04-12 Shuyuan Xu , Wenyue Hua , Yongfeng Zhang

Particle tracking is a fundamental part of the event analysis in high energy and nuclear physics. Events multiplicity increases each year along with the drastic growth of the experimental data which modern HENP detectors produce, so the…

Data Analysis, Statistics and Probability · Physics 2021-10-04 Pavel Goncharov , Egor Schavelev , Anastasia Nikolskaya , Gennady Ososkov

We present FairX, an open-source Python-based benchmarking tool designed for the comprehensive analysis of models under the umbrella of fairness, utility, and eXplainability (XAI). FairX enables users to train benchmarking bias-mitigation…

Machine Learning · Computer Science 2024-09-04 Md Fahim Sikder , Resmi Ramachandranpillai , Daniel de Leng , Fredrik Heintz

We present nerblackbox, a python library to facilitate the use of state-of-the-art transformer-based models for named entity recognition. It provides simple-to-use yet powerful methods to access data and models from a wide range of sources,…

Computation and Language · Computer Science 2023-12-08 Felix Stollenwerk

DoubleML is an open-source Python library implementing the double machine learning framework of Chernozhukov et al. (2018) for a variety of causal models. It contains functionalities for valid statistical inference on causal parameters when…

Machine Learning · Statistics 2022-10-06 Philipp Bach , Victor Chernozhukov , Malte S. Kurz , Martin Spindler

In recent years, deep learning revolutionized machine learning and its applications, producing results comparable to human experts in several domains, including neuroscience. Each year, hundreds of scientific publications present…

Quantitative Methods · Quantitative Biology 2023-01-13 Louis Fabrice Tshimanga , Manfredo Atzori , Federico Del Pup , Maurizio Corbetta

Patient recruitment remains a major bottleneck in clinical trials, calling for scalable and automated solutions. We present TrialMatchAI, an AI-powered recommendation system that automates patient-to-trial matching by processing…

Software developers frequently reuse source code from repositories as it saves development time and effort. Code clones accumulated in these repositories hence represent often repeated functionalities and are candidates for reuse in an…

Software Engineering · Computer Science 2020-10-05 Muhammad Hammad , Önder Babur , Hamid Abdul Basit

Recent work has shown that commonly available machine reading comprehension (MRC) datasets can be used to train high-performance neural information retrieval (IR) systems. However, the evaluation of neural IR has so far been limited to…

Computation and Language · Computer Science 2021-04-19 Revanth Gangi Reddy , Vikas Yadav , Md Arafat Sultan , Martin Franz , Vittorio Castelli , Heng Ji , Avirup Sil

In this paper, we introduce iART: an open Web platform for art-historical research that facilitates the process of comparative vision. The system integrates various machine learning techniques for keyword- and content-based image retrieval…

Information Retrieval · Computer Science 2022-01-10 Matthias Springstein , Stefanie Schneider , Javad Rahnama , Eyke Hüllermeier , Hubertus Kohle , Ralph Ewerth

Prompt-learning has become a new paradigm in modern natural language processing, which directly adapts pre-trained language models (PLMs) to $cloze$-style prediction, autoregressive modeling, or sequence to sequence generation, resulting in…

Computation and Language · Computer Science 2021-11-04 Ning Ding , Shengding Hu , Weilin Zhao , Yulin Chen , Zhiyuan Liu , Hai-Tao Zheng , Maosong Sun

This study presents OpenExtract, an open-source pipeline for automated data extraction in large-scale systematic literature reviews. The pipeline queries large language models (LLMs) to predict data entries based on relevant sections of…

Neural ranking models for information retrieval (IR) use shallow or deep neural networks to rank search results in response to a query. Traditional learning to rank models employ machine learning techniques over hand-crafted IR features. By…

Information Retrieval · Computer Science 2017-05-04 Bhaskar Mitra , Nick Craswell

The objective of Information Extraction (IE) is to derive structured representations from unstructured or semi-structured documents. However, developing IE models is complex due to the need of integrating several subtasks. Additionally,…

Information Retrieval · Computer Science 2024-06-04 Arne Binder , Leonhard Hennig , Christoph Alt

Recent advances in large language model (LLM) reasoning through reinforcement learning rely on annotated datasets for verifiable rewards, which may limit models' ability to surpass human-level performance. While self-play offers a promising…

Computation and Language · Computer Science 2026-01-01 Wai-Chung Kwan , Joshua Ong Jun Leang , Pavlos Vougiouklis , Jeff Z. Pan , Marco Valentino , Pasquale Minervini

DeeProb-kit is a unified library written in Python consisting of a collection of deep probabilistic models (DPMs) that are tractable and exact representations for the modelled probability distributions. The availability of a representative…

Machine Learning · Computer Science 2022-12-09 Lorenzo Loconte , Gennaro Gala

Bibliometric analysis is a critical tool for understanding the structure, dynamics, and impact of scientific research. Traditional methods often fall short in capturing the intricate relationships and evolving trends within scientific…

Digital Libraries · Computer Science 2026-01-27 Mirko Lai , Salvatore Vilella , Federica Cena , Giancarlo Ruffo

While machine learning offers diverse techniques suitable for exploring various medical research questions, a cohesive synergistic framework can facilitate the integration and understanding of new approaches within unified model development…

Machine Learning · Computer Science 2025-01-09 Ramtin Zargari Marandi , Anne Svane Frahm , Jens Lundgren , Daniel Dawson Murray , Maja Milojevic