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With the advent of the Large Array Telescope (LAT) on board the Fermi satellite, a new window on the Universe has been opened. Publicly available, the Fermi-LAT data come together with an analysis software named ScienceTools (ST,…

Instrumentation and Methods for Astrophysics · Physics 2013-07-19 D. A. Sanchez , C. Deil

Most of the solar physicists use very expensive software for data reduction and visualization. We present hereafter a reliable freeware solution based on the Python language. This is made possible by the association of the latter with a…

Astrophysics · Physics 2007-12-11 F. Paletou , R. Rezaei , L. Leger

The problem of complex data analysis is a central topic of modern statistical science and learning systems and is becoming of broader interest with the increasing prevalence of high-dimensional data. The challenge is to develop statistical…

Machine Learning · Statistics 2018-03-05 Faicel Chamroukhi , Hien D. Nguyen

FlowPy is a numerical toolbox for the solution of partial differential equations encountered in Functional Renormalization Group equations. This toolbox compiles flow equations to fast machine code and is able to handle coupled systems of…

Computational Physics · Physics 2015-06-04 Thomas Fischbacher , Franziska Synatschke-Czerwonka

PyPOTS is an open-source Python library dedicated to data mining and analysis on multivariate partially-observed time series with missing values. Particularly, it provides easy access to diverse algorithms categorized into five tasks:…

Machine Learning · Computer Science 2025-07-10 Wenjie Du , Yiyuan Yang , Linglong Qian , Jun Wang , Qingsong Wen

Animal cells are both encapsulated and subdivided by lipid bilayer membranes. Beyond just acting as boundaries, these membranes' shapes influence the function of cells and their compartments. Physically, membranes are two-dimensional fluids…

Soft Condensed Matter · Physics 2023-03-23 George Dadunashvili , Timon Idema

Major advancements in fields as diverse as biology and quantum computing have relied on a multitude of microscopic techniques. All optical, electron and scanning probe microscopy advanced with new detector technologies and integration of…

Instrumentation and Detectors · Physics 2023-03-01 Rama Vasudevan , Mani Valleti , Maxim Ziatdinov , Gerd Duscher , Suhas Somnath

Computational analysis of performed music is a key component of music information research, as performance shapes much of the music we hear. Music performance analysis studies the acoustic variations introduced by performers and how these…

Sound · Computer Science 2026-05-06 Corentin Guichaoua , Daniel Bedoya , Elaine Chew

Compound AI applications, which compose calls to ML models using a general-purpose programming language like Python, are widely used for a variety of user-facing tasks, from software engineering to enterprise automation, making their…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-19 Stephen Mell , David Mell , Konstantinos Kallas , Steve Zdancewic , Osbert Bastani

Correct performance assessment is crucial for evaluating modern artificial intelligence algorithms in medicine like deep-learning based medical image segmentation models. However, there is no universal metric library in Python for…

Computer Vision and Pattern Recognition · Computer Science 2022-01-25 Dominik Müller , Dennis Hartmann , Philip Meyer , Florian Auer , Iñaki Soto-Rey , Frank Kramer

Motivation: Peptides have attracted the attention in this century due to their remarkable therapeutic properties. Computational tools are being developed to take advantage of existing information, encapsulating knowledge and making it…

Functional depth is the functional data analysis technique that orders a functional data set. Unlike the case of data on the real line, defining this order is non-trivial, and particularly, with functional data, there are a number of…

Methodology · Statistics 2022-06-29 Alicia Nieto-Reyes , John A. D. Aston

FMRI data are noisy, complicated to acquire, and typically go through many steps of processing before they are used in a study or clinical practice. Being able to visualize and understand the data from the start through the completion of…

Neurons and Cognition · Quantitative Biology 2024-11-21 Richard C. Reynolds , Daniel R. Glen , Gang Chen , Ziad S. Saad , Robert W. Cox , Paul A. Taylor

We introduce a Python framework designed to automate the most common tasks associated with the extraction and upscaling of the statistics of single-impact crater functions to inform coefficients of continuum equations describing surface…

Computational Physics · Physics 2014-10-31 Scott A. Norris

Active inference is an account of cognition and behavior in complex systems which brings together action, perception, and learning under the theoretical mantle of Bayesian inference. Active inference has seen growing applications in…

Artificial Intelligence · Computer Science 2022-05-06 Conor Heins , Beren Millidge , Daphne Demekas , Brennan Klein , Karl Friston , Iain Couzin , Alexander Tschantz

Molecular dynamics simulations play an increasingly important role in the rational design of (nano)-materials and in the study of biomacromolecules. However, generating input files and realistic starting coordinates for these simulations is…

Poor data quality has become a pervasive issue due to the increasing complexity and size of modern datasets. Constraint based data cleaning techniques rely on integrity constraints as a benchmark to identify and correct errors. Data values…

Databases · Computer Science 2017-05-25 Sridevi Baskaran , Alexander Keller , Fei Chiang , Golab Lukasz , Jaroslaw Szlichta

Statistical analysis of functional data is challenging due to their complex patterns, for which functional depth provides an effective means of reflecting their ordering structure. In this work, we investigate practical aspects of the…

Methodology · Statistics 2026-02-27 Filip Bočinec , Stanislav Nagy , Hyemin Yeon

We introduce BlaBla, an open-source Python library for extracting linguistic features with proven clinical relevance to neurological and psychiatric diseases across many languages. BlaBla is a unifying framework for accelerating and…

Computation and Language · Computer Science 2020-05-21 Abhishek Shivkumar , Jack Weston , Raphael Lenain , Emil Fristed

We describe OHBA Software Library for the analysis of electrophysiological data (osl-ephys). This toolbox builds on top of the widely used MNE-Python package and provides unique analysis tools for magneto-/electro-encephalography (M/EEG)…

Quantitative Methods · Quantitative Biology 2024-10-30 Mats W. J. van Es , Chetan Gohil , Andrew J. Quinn , Mark W. Woolrich